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Job DescriptionP43672
Confidence96.85%DateWed Jan 25 15:20:54 GMT 2012
Rank182Aligned Residues95
% Identity22%Templatec3u5zM_
PDB info PDB header:dna binding protein/dnaChain: M: PDB Molecule:dna polymerase accessory protein 44; PDBTitle: structure of t4 bacteriophage clamp loader bound to the t4 clamp,2 primer-template dna, and atp analog
Resolution3.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   348.350.........360.........370.........380.........390.........400.........410.........420.......
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Query Sequence  IALIGPNGCGKTTLLKLMLGQLQADSGRIHVGTKLEVAYFDQHRAELDPDKTVMDNLAEGKQEVMVNGKPRHVLGYLQDF
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Template Sequence  ILHSPSPGTGKTTVAKALCHDVNADMMFVNGSDCK. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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   46...50.........60.........70.........80
 
   428.430.........440.........450.........460.........470.........480........ .490........
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Query Sequence  LFHPKRAMTPVRALSGGERNRLLLARLFLKPSNLLILDEPTNDLDVETLELLEELIDSYQG. . TVLLVSHDRQ
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Template Sequence  . . . . . . . . . . . IDFVRGPLTNFASAASFDGRQKVIVIDEFDRSGLAESQRHLRSFMEAYSSNCSIIITANNID
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GGGTTTTS
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   81........90.........100.........110.........120.........130.........140..
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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