Job Description P43672 Confidence 100.00% Date Wed Jan 25 15:20:54 GMT 2012 Rank 42 Aligned Residues 254 % Identity 24% Template c3nhaA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:atp-binding cassette sub-family b member 6, mitochondrial; PDBTitle: nucleotide binding domain of human abcb6 (adp mg bound structure) Resolution 2.10 Å

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		285	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	R	A	L	K	A	M	R	R	E	R	G	E	R	R	E	V	M	G	T	A	K	M	Q	V	E	E	A	S	R	S	G	K	I	V	F	E	M	E	D	V	C	Y	Q	V	N	G	K	Q	L	V	K	D	F	S	A	Q	V	L	R	G	D	K	I	A	L	I	G	P	N	G	C	G	K	T	T	L	L	K	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	H	M	F	I	D	M	E	N	M	F	D	L	L	K	E	E	T	E	V	K	D	L	P	G	A	G	P	L	R	F	Q	K	G	R	I	E	F	E	N	V	H	F	S	Y	A	D	R	E	T	L	Q	D	V	S	F	T	V	M	P	G	Q	T	L	A	L	V	G	P	S	G	A	G	K	S	T	I	L	R	L
Template Known Secondary structure		G	G	G	G										T		S	S							T	T							S	S												S					S										T	T								S	T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		555	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.
		365	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380												.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.			.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.																																			.	.
Query SS confidence																		.	.	.	.	.	.	.	.	.	.	.																																			.	.
Query Sequence		M	L	G	Q	L	Q	A	D	S	G	R	I	H	V	G	T	.	.	.	.	.	.	.	.	.	.	.	K	L	E	V	A	Y	F	D	Q	H	R	A	E	L	D	P	D	K	T	V	M	D	N	L	A	E	G	K	Q	E	V	M	V	N	.	.	G	K	P	R	H	V	L	G	Y	L	Q	D	F	L	F	H	P
Query Conservation																		.	.	.	.	.	.	.	.	.	.	.																																			.	.
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.																	.	.																	.	.
Template Conservation																																													.	.
Template Sequence		L	F	R	F	Y	D	I	S	S	G	C	I	R	I	D	G	Q	D	I	S	Q	V	T	Q	A	S	L	R	S	H	I	G	V	V	P	Q	D	T	V	L	F	N	D	.	.	T	I	A	D	N	I	R	Y	G	R	V	T	A	G	N	D	E	V	E	A	A	A	Q	A	A	G	I	H	D	A	I	M	A	F	P
Template Known Secondary structure			T	T	S	S			S							T	T			G	G	G	S								T						S	S					S		.	.								T	T	S	T	T														T							T	S	T
Template Predicted Secondary structure																																													.	.
Template SS confidence
		636	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.			.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.
		432	.	.	.	.	.	.	.					440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.			.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.
Predicted Secondary structure										.	.	.	.																																																.	.
Query SS confidence										.	.	.	.																																																.	.
Query Sequence		K	R	A	M	T	P	V	R	.	.	.	.	A	L	S	G	G	E	R	N	R	L	L	L	A	R	L	F	L	K	P	S	N	L	L	I	L	D	E	P	T	N	D	L	D	V	E	T	L	E	L	L	E	E	L	I	D	S	Y	.	.	Q	G	T	V	L	L	V	S	H	D	R	Q	F	V	D	N	T	V	T
Query Conservation										.	.	.	.																																																.	.
Alig confidence										.	.	.	.																																																.	.																	.
Template Conservation																																																																															.
Template Sequence		E	G	Y	R	T	Q	V	G	E	R	G	L	K	L	S	G	G	E	K	Q	R	V	A	I	A	R	T	I	L	K	A	P	G	I	I	L	L	D	E	A	T	S	A	L	D	T	S	N	E	R	A	I	Q	A	S	L	A	K	V	C	A	N	R	T	T	I	V	V	A	H	R	L	S	T	V	V	N	.	A	D
Template Known Secondary structure		T	G	G	G				S	T	T	S	B																					S								S	S																			T	T	S								S						T	.		S
Template Predicted Secondary structure																																																																															.
Template SS confidence
		714	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790		.	.
		506	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	C	W	I	F	E	G	G	G	K	I	G	R	Y	V	G	G	Y	H	D	A	R	G	Q	Q	E	Q	Y	V	A	L	K	Q	P	A	V	K	K
Query Conservation
Alig confidence								.								.
Template Conservation								.								.
Template Sequence		Q	I	L	V	I	K	.	D	G	C	I	V	E	R	.	G	R	H	E	A	L	L	S	R	G	G	V	Y	A	D	M	W	Q	L	Q	Q	G	Q
Template Known Secondary structure								.	T	T						.										T	S
Template Predicted Secondary structure								.								.
Template SS confidence
		793	.	.	.	.	.		.	800	.	.	.	.	.		.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions