Job Description P43672 Confidence 97.27% Date Wed Jan 25 15:20:54 GMT 2012 Rank 123 Aligned Residues 152 % Identity 13% Template c3bh0A_ PDB info PDB header:replication Chain: A: PDB Molecule:dnab-like replicative helicase; PDBTitle: atpase domain of g40p Resolution 2.35 Å

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		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	E	D	N	E	R	V	C	L	V	G	R	N	G	A	G	K	S	T	L	M	K	I	L	N	R	E	Q	G	L	D	D	G	R	I	I	Y	E	Q	D	L	I	V	A	R	L	Q	Q	D	P	P	R	N	V	E	G	S	V	Y	D	F	V	A	E	G	I	E	E	Q	A	E	Y	L	K	R	Y	H	D	I	S
Query Conservation
Alig confidence																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.
Template Conservation																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.
Template Sequence		Y	K	R	R	N	F	V	L	I	A	A	R	P	S	M	G	K	T	A	F	A	L	K	Q	A	K	N	M	S	D	N	D	D	V	V	N	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	S	L	E	M	G	K	K	E	N	I	K	R	L	I	V	T	A	G	S	I	N	A	Q	.	.	.	K	I
Template Known Secondary structure		B		T	T									T	T	S	S														T	T	T						.	.	.	.	.	.	.	.	.	.	.	.	.	.			S	S	S														T	T					.	.	.
Template Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.
Template SS confidence
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.															.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.				.	.
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.			.	.	.	.	.	180	.	.	.
Predicted Secondary structure																																																																							.	.
Query SS confidence																																																																							.	.
Query Sequence		R	L	V	M	N	D	P	S	E	K	N	L	N	E	L	A	K	V	Q	E	Q	L	D	H	H	N	L	W	Q	L	E	N	R	I	N	E	V	L	A	Q	L	G	L	D	P	N	V	A	L	S	S	L	S	G	G	W	L	R	K	A	A	L	G	R	A	L	V	S	N	.	.	P	R	V	L	L	L	D	E	P
Query Conservation																																																																							.	.
Alig confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.
Template Conservation																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	A	A	R	R	D	F	A	S	E	D	W	G	K	L	S	M	A	I	G	E	I	S	N	S	N	I	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	F	D	K	A	G	Q	S	V	N	Y	I	W	S	K	T	R	Q	T	K	R	K	N	P	G	K	R	V	I	V	M	I	D	Y	L
Template Known Secondary structure			S							S	S														T	S				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					S			B														T	S	S	S										G
Template Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.																		.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
		184	.	.	.	.												.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.
Query SS confidence							.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	N	H	L	D	.	.	.	.	.	.	.	.	.	.	.	I	E	T	I	D	W	L	E	G	F	L	K	T	F	N	G	T	I	I	F	I	S	H
Query Conservation							.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	L	L	E	P	A	K	A	N	D	S	R	T	N	Q	I	S	Q	I	S	R	D	L	K	K	M	A	R	E	L	D	V	V	V	I	A	L	S	Q
Template Known Secondary structure		G	G	S	B		S		T	T	S																					T
Template Predicted Secondary structure
Template SS confidence
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions