Job Description P43672 Confidence 100.00% Date Wed Jan 25 15:20:54 GMT 2012 Rank 31 Aligned Residues 208 % Identity 25% Template c2yz2B_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:putative abc transporter atp-binding protein tm_0222; PDBTitle: crystal structure of the abc transporter in the cobalt transport2 system Resolution 2.30 Å

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		320	.	.	.	.	.	.	.	.	.	330						.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380									.	.	.	.	.	.
Predicted Secondary structure													.	.	.	.	.																																																			.	.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.																																																			.	.	.	.	.	.	.	.
Query Sequence		F	E	M	E	D	V	C	Y	Q	V	N	.	.	.	.	.	G	K	Q	L	V	K	D	F	S	A	Q	V	L	R	G	D	K	I	A	L	I	G	P	N	G	C	G	K	T	T	L	L	K	L	M	L	G	Q	L	Q	A	D	S	G	R	I	H	V	G	T	.	.	.	.	.	.	.	.	K	L	E	V	A	Y
Query Conservation													.	.	.	.	.																																																			.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.																																																			.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	E	V	V	N	V	S	H	I	F	H	R	G	T	P	L	E	K	K	A	L	E	N	V	S	L	V	I	N	E	G	E	C	L	L	V	A	G	N	T	G	S	G	K	S	T	L	L	Q	I	V	A	G	L	I	E	P	T	S	G	D	V	L	Y	D	G	E	R	K	K	G	Y	E	I	R	R	N	I	G	I
Template Known Secondary structure												T	T	T	S	T	T														T	T								S	T	T											T	T	S	S			S							T	T									G	G	G
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		387	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.		.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.		.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.
Predicted Secondary structure																														.																					.
Query SS confidence																														.																					.
Query Sequence		F	D	Q	H	R	A	E	L	D	P	D	K	T	V	M	D	N	L	A	E	G	K	Q	E	V	M	V	N	.	G	K	P	R	H	V	L	G	Y	L	Q	D	F	L	F	H	P	K	R	A	.	M	T	P	V	R	A	L	S	G	G	E	R	N	R	L	L	L	A	R	L	F	L	K	P	S	N	L	L	I	L
Query Conservation																														.																					.
Alig confidence																														.																					.
Template Conservation
Template Sequence		A	F	Q	Y	P	E	D	Q	F	F	A	E	R	V	F	D	E	V	A	F	A	V	K	N	F	Y	P	D	R	D	P	V	P	L	V	K	K	A	M	E	F	V	G	L	D	F	D	S	F	K	D	R	V	P	F	F	L	S	G	G	E	K	R	R	V	A	I	A	S	V	I	V	H	E	P	D	I	L	I	L
Template Known Secondary structure				S	S	G	G	G	G				S	S														T	T	S														T							T	T	S		G	G	G	S															T	T			S
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		465	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.			.	.		.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.			.
Query SS confidence																								.	.			.
Query Sequence		D	E	P	T	N	D	L	D	V	E	T	L	E	L	L	E	E	L	I	D	S	Y	.	.	Q	G	.	T	V	L	L	V	S	H	D	R	Q	F	V	D	N	T	V	T	E	C	W	I	F	E	G	G	G	K	I	G	R	Y	V	G	G	Y	H	D	A	R	G	Q
Query Conservation																								.	.			.
Alig confidence																								.	.			.																								.							.
Template Conservation																																																				.							.
Template Sequence		D	E	P	L	V	G	L	D	R	E	G	K	T	D	L	L	R	I	V	E	K	W	K	T	L	G	K	T	V	I	L	I	S	H	D	I	E	T	V	I	N	H	V	D	R	V	V	V	L	E	.	K	G	K	K	V	F	.	D	G	T	R	M	E	F	L	E	K
Template Known Secondary structure			S	T	T	T	T																			T	T								S						G	G	G		S							.	T	T					.
Template Predicted Secondary structure																																																				.							.
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.		.	.	.	.	.	.		.	220	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions