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Job DescriptionP43672
Confidence100.00%DateWed Jan 25 15:20:54 GMT 2012
Rank51Aligned Residues216
% Identity24%Templatec2ihyB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:abc transporter, atp-binding protein; PDBTitle: structure of the staphylococcus aureus putative atpase subunit of an2 atp-binding cassette (abc) transporter
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.... ....
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Query Sequence  SLISMHGAWLSFSDAPLLDNAELHIEDNERVCLVGRNGAGKSTLMKILNREQGLDDGRIIYEQ. . . . . . . . . . . . . DLIV
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Template Sequence  XLIQLDQIGRXKQGKTILKKISWQIAKGDKWILYGLNGAGKTTLLNILNAYEPATSGTVNLFGKXPGKVGYSAETVRQHI
Template Known Secondary structure  TTTT


TTSSTTSS

STTB
TTSTT

TT
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   1........10.........20.........30.........40.........50.........60.........70.........80
 
   6970.... .....80.........90.........100.........110.........120.........130.........140......
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Query Sequence  ARLQQD. . PPRNVEGSVYDFVAEGIEEQAEYLKRYHDISRLVMNDPSEKNLNELAKVQEQLDHHNLWQLENRINEVLAQL
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Template Sequence  GFVSHSLLEKFQEGERVIDVVISGAFKSIGV. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . YQDIDDEIRNEAHQLLKLV
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TTS
TTSBTTT
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   81........90.........100.........110. ........120.........130
 
   147. .150.........160.........170.........180.........190.........200.... .....210.........
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Query Sequence  GL. . DPNVALSSLSGGWLRKAALGRALVSNPRVLLLDEPTNHLDIETIDWLEGFLKTFNG. . . . . TIIFISHDRSFIRNM
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Template Sequence  GXSAKAQQYIGYLSTGEKQRVXIARALXGQPQVLILDEPAAGLDFIARESLLSILDSLSDSYPTLAXIYVTHFIEEITAN
Template Known Secondary structure  T
GGGTTSBGGGS
TTT

SSTTTT


TT
S
GGG

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   131........140.........150.........160.........170.........180.........190.........200.........210
 
   220.........230.........240........
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Query Sequence  ATRIVDLDRGKLVTYPGNYDQYLLEKEEA
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Template Sequence  FSKILLLKDGQSIQ. QGAVEDILTSENXS
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   211........220.... .....230........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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