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Job DescriptionP43672
Confidence96.96%DateWed Jan 25 15:20:54 GMT 2012
Rank161Aligned Residues95
% Identity22%Templatec1xx6B_
PDB info PDB header:transferaseChain: B: PDB Molecule:thymidine kinase; PDBTitle: x-ray structure of clostridium acetobutylicum thymidine kinase with2 adp. northeast structural genomics target car26.
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   343......350.........360 .........370.........380.........390.........400.........410.........420.
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Query Sequence  LRGDKIALIGPNGCGKTT. LLKLMLGQLQADSGRIHVGTKLEVAYFDQHRAELDPDKTVMDNLAEGKQEVMVNGKPRHVL
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Template Sequence  DHGWVEVIVGPXYSGKSEELIRRIRRAKI. . . . . . . . . AKQKIQVFKPEAVAIKNSREILKYFE. . . . . . . . . . . . . . . .
Template Known Secondary structure  T


STTSS.........TT





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   6...10.........20.........30.... .....40.........50.........60
 
   422.......430.........440.........450.........460.........470.........480.........490.........
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Query Sequence  GYLQDFLFHPKRAMTPVRALSGGERNRLLLARLFLKPSNLLILDEPTNDLDVETLELLEELIDSYQGTVLLVSHDRQF
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . EDTEVIAIDE. VQFFDDEIVEIVNKIAES. GRRVICAGLDXDF
Template Known Secondary structure  ...................................TT
S
S.GGGS
TT.T

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   80......... 90.........100....... ..110.........120
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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