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Job DescriptionP0A6F3
Confidence98.38%DateThu Jan 5 11:03:00 GMT 2012
Rank43Aligned Residues278
% Identity16%Templatec3vgkB_
PDB info PDB header:transferaseChain: B: PDB Molecule:glucokinase; PDBTitle: crystal structure of a rok family glucokinase from streptomyces2 griseus
Resolution3.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20.........30.........40.........50.........60.........70.........80.....
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Query Sequence  YIVALDQGTTSSRAVVMDHDANIISVSQREFEQIYPKPGWVEHDPMEIWATQSSTLVEVLAKADISSDQIAAIGITNQRE
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Template Sequence  LTIGVDIGGTKIAAGVVDEEGRILSTFKVATPP. . . . . . . . . . TAEGIVDAICAAVAGASEGHD. . . . . VEAVGIGAAG.
Template Known Secondary structure  TT
TT



S..........SSSTTTT

.....SS.
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   3......10.........20.........30..... ....40.........50...... ...60......
 
   86...90.........100.........110.........120.........130.........140.........150.........160.....
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Query Sequence  TTIVWEKETGKPIYNAIVWQCRRTAEICEHLKRDGLEDYIRSNTGLVIDPYFSGTKVKWILDHVEGSRERARRGELLFGT
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Template Sequence  . . . YVDDKRATVLFAPNIDWRH. . . . . . . . . . . . EPLKDKVEQRVGLPVVVENDANAAAWGEY. . . . . . . . . . . . . . . . .
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TTS


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   67..70.........80..... ....90.........100.........110....
 
   166...170.........180.........190.........200.........210.........220.........230.........240.....
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Query Sequence  VDTWLIWKMTQGRVHVTDYTNASRTMLFNIHTLDWDDKMLEVLDIPREMLPEVRRSSEVYGQTNIGGKGGTRIPISGIAG
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   246...250.........260.........270.........280.........290......... 300.........310........
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Query Sequence  DQQAALFGQLCVKEGMAKNTYGTGCFMLMNTGEKAVKSENGLLTTIACGPTGEV. . . . . . . NYALEGAVFMAGASIQWLR
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Template Sequence  . . . . . RFGAGQGHDDVICITLGTGLGGGIIIGNKLRRGRFGVAAEFGHIRVVPDGLLCGCGSQGCWEQYASGRALVRYAK
Template Known Secondary structure  .....TSTTSS
SSSSSTT

SSS



GGGSB
STT
SB
TTSSB
BGGGTSS
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   115....120.........130.........140.........150.........160.........170.........180.........
 
   319320.........330.........340.........350.........360.........370........ .380........
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Query Sequence  DEMKLINDAYDSEYFATKVQNTNGVYVVPAFTGLGAPYWDPYARGAIFGLTRGVNANHII. . . . . . . . . . RATLESIAYQ
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Template Sequence  QRANATPENAAVLLGLGDGS. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . VDGIEGKHISEAARQGDPVAVDSFRELARW
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GGG
SSSS..............................TT


TTT
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   190.........200......... 210.........220.........230.........
 
   389390.........400.........410..... ....420....... ..430...... ...440........
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Query Sequence  TRDVLEAMQADSGIRLHALRVDGGAVA. NNFLMQFQSDIL. . . . . . . . . . . GTRVERPEV. REVTALGAAYLA
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Template Sequence  AGAGLADLASL. . FDPSAFIVGGGVSDEGELVLDPIRKSFRRWLIGGEWRPHAQVLAAQLGGKAGLVGAADLA
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SSTTGGGT
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   240.........250 .........260.........270.........280.........290.........300.........310
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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