 |
Job Description | P0A6F3 | Confidence | 96.95% | Date | Thu Jan 5 11:03:00 GMT 2012 |
Rank | 76 | Aligned Residues | 75 |
% Identity | 24% | Template | c3qbwA_ |
PDB info |
PDB header:transferase | Chain: A: PDB Molecule:anhydro-n-acetylmuramic acid kinase; |
PDBTitle: crystal structure of pseudomonas aeruginosa 1,6-anhydro-n-2 actetylmuramic acid kinase (anmk) bound to adenosine diphosphate
|
Resolution | 2.23 Å |
|
 |
  |   |
370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | |
. | . | 430 | . | . | . | . | . | . | . | |
|
. | . | 440 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  | . |
|
|  |  |  |  |  |
|
|
| . | . |
|  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | G | V | N | A | N | H | I | I | R | A | T | L | E | S | I | A | Y | Q | T | R | D | V | L | E | A | M | Q | A | D | S | G | I | R | L | H | A | L | R | V | D | G | G | A | V | A | N | N | F | L | M | Q | F | Q | S | D | I | L | . |
G | T | R | V | E | R | P | E | V | R | . |
. |
E | V | T | A | L | G | A | A | Y |
Query Conservation |   |
  |   |   |   |   |   |   |
|   |
|
|
|
|
|
|
|
|   |   |   |   |   |   |
|   |   |
|   |   |   |   |
|   |   |   |   |   |
|   |   |   |
|
|   |
|   |
|   |   |   |   |
|
|   |
|
|
|   | . |
|   |
|
|   |   |   |   |   |   | . | . |
|   |   |
|   |
|
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|   |   |
|   |   |
|
|
|
|   |   |
|
|   |
|
|   |   |   |   |   |   |   | . | . | . | . | . | . | . |   |   |   |
|
|
|   |
|
|
|
|   |
|   |   |
|
|   |   |
|   |   |   |
|   |   |   |   |
|   |   |   |   |   |   |
|
|   |   |   |
|   |
|
|   |
|
Template Sequence |   |
P | A | L | P | A | A | D | I | Q | A | T | L | L | E | L | S | A | R | S | I | S | E | S | L | L | D | A | . |
. |
. |
. |
. |
. |
. |
Q | P | D | V | L | V | C | G | G | G | A | F | N | T | A | L | M | K | R | L | A | M | L | M | P | E | A | R | V | A | S | T | D | E | Y | G | I | P | P | A | W | M | E | G | M | A |
Template Known Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . |
|
|
|
|  |  |  | S | G | G | G | G |
|  |  |  |  |  |  |  |  |  |  |
| T | T | S |
|
|  |  | G | G | G | G | T | S |
| G | G | G |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| . | . | . | . | . | . | . |
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
254 | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | |
|
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . |
  |
  |   |
447 | . | . | 450 | . |
Predicted Secondary structure |   |
 |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
Query Sequence |   |
L | A | G | L | A |
Query Conservation |   |
|
|   |   |   |
Alig confidence |   |
|
|
|
|
|
Template Conservation |   |
|
|   |
|
|
Template Sequence |   |
F | A | W | L | A |
Template Known Secondary structure |   |
 |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
  |   |
330 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|