Job Description P0A6F3 Confidence 100.00% Date Thu Jan 5 11:03:00 GMT 2012 Rank 14 Aligned Residues 483 % Identity 21% Template c3gg4B_ PDB info PDB header:transferase Chain: B: PDB Molecule:glycerol kinase; PDBTitle: the crystal structure of glycerol kinase from yersinia2 pseudotuberculosis Resolution 2.00 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	K	K	Y	I	V	A	L	D	Q	G	T	T	S	S	R	A	V	V	M	D	H	D	A	N	I	I	S	V	S	Q	R	E	F	E	Q	I	Y	P	K	P	G	W	V	E	H	D	P	M	E	I	W	A	T	Q	S	S	T	L	V	E	V	L	A	K	A	D	I	S	S	D	Q	I	A	A	I	G	I	T	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	A	S	Y	F	I	G	V	D	V	G	T	G	S	A	R	A	G	V	F	D	L	Q	G	R	X	V	G	Q	A	S	R	E	I	T	X	F	K	P	K	A	D	F	V	E	Q	S	S	E	N	I	W	Q	A	V	C	N	A	V	R	D	A	V	N	Q	A	D	I	N	P	I	Q	V	K	G	L	G	F	D	A
Template Known Secondary structure													S	S									T	T														B		S	S	T	T																									T			G	G	G
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.										.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.	.	.	.
Query Sequence		Q	R	E	T	T	I	V	W	E	K	E	T	G	K	P	I	.	.	.	.	.	.	.	.	.	Y	N	A	I	V	W	Q	C	R	R	T	A	E	I	C	E	H	L	K	R	D	G	L	E	D	Y	I	R	S	N	T	G	L	V	I	D	P	Y	F	S	G	T	K	V	K	W	I	L	D	H	V	E	G	S	R
Query Conservation																		.	.	.	.	.	.	.	.	.
Alig confidence				.									.					.	.	.	.	.	.	.	.	.																									.	.
Template Conservation				.									.																																						.	.
Template Sequence		T	C	.	S	L	V	V	L	D	K	E	.	G	N	P	L	T	V	S	P	S	G	R	N	E	Q	N	V	I	V	W	X	D	H	R	A	I	T	Q	A	E	R	I	N	A	T	K	H	P	.	.	V	L	E	F	V	G	G	V	I	S	P	E	X	Q	T	P	K	L	L	W	L	K	Q	H	X	P	N	T	W
Template Known Secondary structure			S	.							T	T	.	S		B				S	T	T			T	T						T	T			T	T											T		G	.	.	G	G	G	G	G	T	T				T	T	S
Template Predicted Secondary structure				.									.																																						.	.
Template SS confidence
		81	.		.	.	.	.	.	.	.	90		.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.			.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure																																																																										.	.	.	.	.	.	.	.
Query SS confidence																																																																										.	.	.	.	.	.	.	.
Query Sequence		E	R	A	R	R	G	E	L	L	F	G	T	V	D	T	W	L	I	W	K	M	T	Q	G	R	V	H	V	T	D	Y	T	N	A	S	R	T	M	L	F	N	I	H	T	L	D	W	D	D	K	M	L	E	V	L	D	I	P	R	E	M	L	P	E	V	R	R	S	S	E	V	Y	.	.	.	.	.	.	.	.
Query Conservation																																																																										.	.	.	.	.	.	.	.
Alig confidence							.	.	.	.																.	.																																															.	.	.	.	.	.	.	.
Template Conservation							.	.	.	.																.	.
Template Sequence		S	N	V	G	H	.	.	.	.	L	F	D	L	P	D	F	L	T	W	R	A	T	K	D	.	.	E	T	R	S	L	C	S	T	V	C	K	W	T	Y	L	G	H	E	D	R	W	D	P	S	Y	F	K	L	V	G	L	A	D	L	L	D	N	N	A	A	K	I	G	A	T	V	K	P	X	G	A	P	L	G
Template Known Secondary structure							.	.	.	.														S		.	.												S			B	T	T	T	T	B										T		G	G	G	G					T	T	T		S					T	T		B		T
Template Predicted Secondary structure							.	.	.	.																.	.
Template SS confidence
		157	.	.	160	.					.	.	.	.	.	.	.	.	170	.	.	.	.	.	.			.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
		226	.	.	.	230	.	.	.	.	.	.	.	.					.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
Predicted Secondary structure															.	.	.	.
Query SS confidence															.	.	.	.
Query Sequence		G	Q	T	N	I	G	G	K	G	G	T	R	I	.	.	.	.	P	I	S	G	I	A	G	D	Q	Q	A	A	L	F	G	Q	L	C	V	K	E	G	M	A	K	N	T	Y	G	T	G	C	F	M	L	M	N	T	G	E	K	A	V	K	S	E	N	G	L	L	T	T	I	A	C	G	P	T	G	E	V	N	Y
Query Conservation															.	.	.	.
Alig confidence															.	.	.	.																																																											.	.	.
Template Conservation																																																																													.	.	.
Template Sequence		H	G	L	S	Q	R	A	A	S	E	X	G	L	I	P	G	T	A	V	S	V	S	I	I	D	A	H	A	G	T	I	G	I	L	G	A	S	D	R	R	I	A	L	I	G	G	T	S	T	A	H	X	A	X	S	R	S	A	H	F	I	S	G	I	W	G	P	Y	Y	S	A	I	L	P	E	.	.	.	Y	W
Template Known Secondary structure		T	S	S									T			T	T				B														T	T											S	S	S								S	S					T	T	S						T	S	S	S	T	T	.	.	.
Template Predicted Secondary structure																																																																													.	.	.
Template SS confidence
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.				.	.
		302	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.																					.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.
Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	L	E	G	A	V	F	M	A	G	A	S	I	Q	W	L	R	D	E	M	K	L	I	N	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	Y	D	S	E	Y	F	A	T	K	V	Q	N	T	N	G	V	Y	V	V	P	A	F	T	G	L	G	A	P	Y	W	D	P	Y	A
Query Conservation																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	N	E	G	G	Q	S	A	T	G	A	L	I	D	H	I	I	Q	S	H	P	C	Y	P	A	L	L	E	Q	A	K	N	K	G	E	T	I	Y	E	A	L	N	Y	I	L	R	Q	X	A	G	E	P	E	N	I	A	F	L	T	N	D	I	H	X	L	P	Y	F	H	G	N	R	S	P	R	A	N	P	N	L
Template Known Secondary structure								S		S											S	T	T											T	T																S	S	G	G	G	S	G	G	G	G	T	T							T	T		B		T	T	T		B	T	T
Template Predicted Secondary structure
Template SS confidence
		317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.
		362	.	.	.	.	.	.	.	370	.	.	.	.	.	.				.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.
Query SS confidence																	.	.	.
Query Sequence		R	G	A	I	F	G	L	T	R	G	V	N	A	N	H	.	.	.	I	I	R	A	T	L	E	S	I	A	Y	Q	T	R	D	V	L	E	A	M	Q	A	D	S	G	I	R	L	H	A	L	R	V	D	G	G	A	V	A	N	N	F	L	M	Q	F	Q	S	D	I	L	G	T	R	V	E	R	P	E	V	R	E
Query Conservation																	.	.	.
Alig confidence																	.	.	.																							.
Template Conservation																																										.
Template Sequence		T	G	I	I	T	G	L	K	L	S	T	T	P	E	D	X	A	L	R	Y	L	A	T	I	Q	A	L	A	L	G	T	R	H	I	I	E	T	X	N	Q	.	N	G	Y	N	I	D	T	X	X	A	S	G	G	G	T	K	N	P	I	F	V	Q	E	H	A	N	A	T	G	C	A	X	L	L	P	E	E	S	E
Template Known Secondary structure										S			S																												T	.	T	T											T	T	T	T													T	S						S	S	S
Template Predicted Secondary structure																																										.
Template SS confidence
		397	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.		.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.
		439	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.		.	.	.	470	.	.	.	.	.	.	.	.	.		480	.	.	.		.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																														.														.					.
Query SS confidence																														.														.					.
Query Sequence		V	T	A	L	G	A	A	Y	L	A	G	L	A	V	G	F	W	Q	N	L	D	E	L	Q	E	K	A	V	.	I	E	R	E	F	R	P	G	I	E	T	T	E	.	R	N	Y	R	.	Y	A	G	W	K	K	A	V	K	R	A	M	A	W	E	E
Query Conservation																														.														.					.
Alig confidence																														.														.					.
Template Conservation
Template Sequence		A	X	L	L	G	S	A	X	X	G	T	V	A	A	G	V	F	E	S	L	P	E	A	X	A	A	X	S	R	I	G	K	T	V	T	P	Q	T	N	K	I	K	A	Y	Y	D	R	K	Y	R	V	F	H	Q	X	Y	H	D	H	X	R	Y	Q	A
Template Known Secondary structure															T	T	S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		476	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.