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Job DescriptionP0A6F3
Confidence100.00%DateThu Jan 5 11:03:00 GMT 2012
Rank3Aligned Residues495
% Identity56%Templatec3flcX_
PDB info PDB header:transferaseChain: X: PDB Molecule:glycerol kinase; PDBTitle: crystal structure of the his-tagged h232r mutant of glycerol kinase2 from enterococcus casseliflavus with glycerol
Resolution1.85 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60.........70.........80..
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Query Sequence  EKKYIVALDQGTTSSRAVVMDHDANIISVSQREFEQIYPKPGWVEHDPMEIWATQSSTLVEVLAKADISSDQIAAIGITN
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Template Sequence  EKNYVMAIDQGTTSSRAIIFDRNGKKIGSSQKEFPQYFPKSGWVEHNANEIWNSVQSVIAGAFIESGIRPEAIAGIGITN
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SSTTS



B
SSTT





GGG
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   3......10.........20.........30.........40.........50.........60.........70.........80..
 
   83......90.........100.........110.........120.........130.........140.........150.........160..
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Query Sequence  QRETTIVWEKETGKPIYNAIVWQCRRTAEICEHLKRDGLEDYIRSNTGLVIDPYFSGTKVKWILDHVEGSRERARRGELL
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Template Sequence  QRETTVVWDKTTGQPIANAIVWQSRQSSPIADQLKVDGHTEMIHEKTGLVIDAYFSATKVRWLLDNIEGAQEKADNGELL
Template Known Secondary structure 
SS
TTT

BSS

TT

TTTT
S



TTSSTTTT
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   83......90.........100.........110.........120.........130.........140.........150.........160..
 
   163......170.........180.........190.........200.........210.........220.........230.........240..
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Query Sequence  FGTVDTWLIWKMTQGRVHVTDYTNASRTMLFNIHTLDWDDKMLEVLDIPREMLPEVRRSSEVYGQTNIGGKGGTRIPISG
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Template Sequence  FGTIDSWLVWKLTDGQVHVTDYSNASRTMLYNIHKLEWDQEILDLLNIPSSMLPEVKSNSEVYGHTRSYRFYGSEVPIAG
Template Known Secondary structure  TTTS

TTTSTTTT
TT

GGG


S

GGGGTT


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   163......170.........180.........190.........200.........210.........220.........230.........240..
 
   243......250.........260.........270.........280.........290.........300.........310.........320..
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Query Sequence  IAGDQQAALFGQLCVKEGMAKNTYGTGCFMLMNTGEKAVKSENGLLTTIACGPTGEVNYALEGAVFMAGASIQWLRDEMK
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Template Sequence  MAGDQQAALFGQMAFEKGMIKNTYGTGAFIVMNTGEEPLSDNDLLT. TIGYGINGKVYYALEGSIFVAGSAIQWLRDGLR
Template Known Secondary structure  TT

STT
SSST




TTS.TTS
STS
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   243......250.........260.........270.........280........ .290.........300.........310.........320.
 
   323......330.........340.........350.........360.........370.........380.........390.........400..
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Query Sequence  LINDAYDSEYFATKVQNTNGVYVVPAFTGLGAPYWDPYARGAIFGLTRGVNANHIIRATLESIAYQTRDVLEAMQADSGI
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Template Sequence  MIETSPQSEELAAKAKGDNEVYVVPAFTGLGAPYWDSEARGAVFGLTRGTTKEDFVRATLQAVAYQSKDVIDTMKKDSGI
Template Known Secondary structure 
SSSTT

S
S



TT
B
TTT
BTT





TT



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   323......330.........340.........350.........360.........370.........380.........390.........400..
 
   403......410.........420.........430.........440.........450.........460.........470.........480..
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Query Sequence  RLHALRVDGGAVANNFLMQFQSDILGTRVERPEVREVTALGAAYLAGLAVGFWQNLDELQEKAVIEREFRPGIETTERNY
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Template Sequence  DIPLLKVDGGAAKNDLLMQFQADILDIDVQRAANLETTALGAAYLAGLAVGFWKDLDELKSMAEEGQMFTPEMPAEERDN
Template Known Secondary structure 


SGGGG
TSSSS
TTSS

T




S
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   403......410.........420.........430.........440.........450.........460.........470.........480..
 
   483......490........
Predicted Secondary structure 
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Query Sequence  RYAGWKKAVKRAMAWE
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Template Conservation   
              
Template Sequence  LYEGWKQAVAATQTFK
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   483......490........
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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