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Job DescriptionP0A6F3
Confidence100.00%DateThu Jan 5 11:03:00 GMT 2012
Rank4Aligned Residues482
% Identity100%Templatec3ezwD_
PDB info PDB header:transferaseChain: D: PDB Molecule:glycerol kinase; PDBTitle: crystal structure of a hyperactive escherichia coli glycerol kinase2 mutant gly230 --> asp obtained using microfluidic crystallization3 devices
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60.........70.........80..
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Query Sequence  EKKYIVALDQGTTSSRAVVMDHDANIISVSQREFEQIYPKPGWVEHDPMEIWATQSSTLVEVLAKADISSDQIAAIGITN
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Template Sequence  EKKYIVALDQGTTSSRAVVMDHDANIISVSQREFEQIYPKPGWVEHDPMEIWATQSSTLVEVLAKADISSDQIAAIGITN
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SSTT




B

STT


TT

GGG
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   2.......10.........20.........30.........40.........50.........60.........70.........80.
 
   83......90.........100.........110.........120.........130.........140.........150.........160..
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Query Sequence  QRETTIVWEKETGKPIYNAIVWQCRRTAEICEHLKRDGLEDYIRSNTGLVIDPYFSGTKVKWILDHVEGSRERARRGELL
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Template Sequence  QRETTIVWEKETGKPIYNAIVWQCRRTAEICEHLKRDGLEDYIRSNTGLVIDPYFSGTKVKWILDHVEGSRERARRGELL
Template Known Secondary structure 
SS
BTTT

BSS

TT

TTTT
S

SSTTSSTTTTS
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   82.......90.........100.........110.........120.........130.........140.........150.........160.
 
   163......170.........180.........190.........200.........210.........220.........230.........240..
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Query Sequence  FGTVDTWLIWKMTQGRVHVTDYTNASRTMLFNIHTLDWDDKMLEVLDIPREMLPEVRRSSEVYGQTNIGGKGGTRIPISG
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Template Sequence  FGTVDTWLIWKMTQGRVHVTDYTNASRTMLFNIHTLDWDDKMLEVLDIPREMLPEVRRSSEVYGQTN. . . . . . . RIPISG
Template Known Secondary structure 
TTTS

GGGSSTTTT
TT

GGG


S
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   162.......170.........180.........190.........200.........210.........220........ .230....
 
   243......250.........260.........270.........280.........290.........300.........310.........320..
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Query Sequence  IAGDQQAALFGQLCVKEGMAKNTYGTGCFMLMNTGEKAVKSENGLLTTIACGPTGEVNYALEGAVFMAGASIQWLRDEMK
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Template Sequence  IAGDQQAALFGQLCVKEGMAKNTYGTGCFMLMNTGEKAVKSENGLLTTIACGPTGEVNYALEGAVFMAGASIQWLRDEMK
Template Known Secondary structure  TT

STT
SSS
TTS



SSS

TTS
S
STS
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   242.......250.........260.........270.........280.........290.........300.........310.........320.
 
   323......330.........340.........350.........360.........370.........380.........390.........400..
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Query Sequence  LINDAYDSEYFATKVQNTNGVYVVPAFTGLGAPYWDPYARGAIFGLTRGVNANHIIRATLESIAYQTRDVLEAMQADSGI
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Template Sequence  LID. . . . SEYFATKVQNTNGVYVVPAFTGLGAPYWDPYARGAIFGLTRGVNANHIIRATLESIAYQTRDVLEAMQADSGI
Template Known Secondary structure 


....TSSS
TT


TT
B
TTT
BTT





TT



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   322.. .....330.........340.........350.........360.........370.........380.........390.......
 
   403......410.........420.........430.........440.........450.........460.........470.........480..
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Query Sequence  RLHALRVDGGAVANNFLMQFQSDILGTRVERPEVREVTALGAAYLAGLAVGFWQNLDELQEKAVIEREFRPGIETTERNY
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Template Sequence  RLHALRVDGGAVANNFLMQFQSDILGTRVER. . . PEVTALGAAYLAGLAVGFWQNLDELQE. . . IEREFRPGIETTERNY
Template Known Secondary structure 

SSGGGG
TS...

TSSS
T
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S
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   402.......410.........420.........430.. .......440.........450......... 460.........470.....
 
   483......490.........500.
Predicted Secondary structure 

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Query Sequence  RYAGWKKAVKRAMAWEEHD
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Template Conservation            
        
Template Sequence  RYAGWKKAVKRAMAWEEHD
Template Known Secondary structure  SS
S


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   482.......490.........500
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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