Job Description P0A6F3 Confidence 100.00% Date Thu Jan 5 11:03:00 GMT 2012 Rank 2 Aligned Residues 496 % Identity 53% Template c2d4wA_ PDB info PDB header:transferase Chain: A: PDB Molecule:glycerol kinase; PDBTitle: crystal structure of glycerol kinase from cellulomonas sp.2 nt3060 Resolution 2.30 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	Y	I	V	A	L	D	Q	G	T	T	S	S	R	A	V	V	M	D	H	D	A	N	I	I	S	V	S	Q	R	E	F	E	Q	I	Y	P	K	P	G	W	V	E	H	D	P	M	E	I	W	A	T	Q	S	S	T	L	V	E	V	L	A	K	A	D	I	S	S	D	Q	I	A	A	I	G	I	T	N	Q	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	Y	V	L	A	I	D	Q	G	T	T	S	S	R	A	I	V	F	D	H	S	G	E	I	Y	S	T	G	Q	L	E	H	D	Q	I	F	P	R	A	G	W	V	E	H	N	P	E	Q	I	W	N	N	V	R	E	V	V	G	L	A	L	T	R	G	N	L	T	H	E	D	I	A	A	V	G	I	T	N	Q	R
Template Known Secondary structure											S	S									T	T	S													B		S	S	T	T																								T	T			G	G	G										S
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	T	T	I	V	W	E	K	E	T	G	K	P	I	Y	N	A	I	V	W	Q	C	R	R	T	A	E	I	C	E	H	L	K	R	D	G	L	E	D	Y	I	R	S	N	T	G	L	V	I	D	P	Y	F	S	G	T	K	V	K	W	I	L	D	H	V	E	G	S	R	E	R	A	R	R	G	E	L	L	F	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	T	A	V	V	W	D	K	T	T	G	K	P	V	Y	N	A	I	V	W	Q	D	T	R	T	Q	K	I	V	D	E	L	G	G	D	E	G	A	E	K	Y	K	S	I	V	G	L	P	L	A	T	Y	F	S	G	P	K	I	K	W	I	L	D	N	V	E	G	A	R	E	K	A	E	K	G	D	L	L	F	G
Template Known Secondary structure		S		B					T	T	T			B	S	S					T	T			T	T										S	S		G	G	G	G					S			S		T	T	S												S	T	T								T
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.				180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure																	.	.	.
Query SS confidence																	.	.	.
Query Sequence		T	V	D	T	W	L	I	W	K	M	T	Q	G	R	V	.	.	.	H	V	T	D	Y	T	N	A	S	R	T	M	L	F	N	I	H	T	L	D	W	D	D	K	M	L	E	V	L	D	I	P	R	E	M	L	P	E	V	R	R	S	S	E	V	Y	G	Q	T	N	I	G	G	K	G	G	T	R	I	P	I	S
Query Conservation																	.	.	.
Alig confidence																	.	.	.																																																				.
Template Conservation																																																																							.
Template Sequence		N	T	D	T	W	V	L	W	N	M	T	G	G	T	E	G	G	V	H	V	T	D	V	T	N	A	S	R	T	M	L	M	D	L	D	T	L	S	W	R	E	D	I	A	A	D	M	G	I	P	L	S	M	L	P	D	I	R	S	S	S	E	V	Y	G	H	G	R	P	.	R	G	L	V	P	G	V	P	I	A
Template Known Secondary structure												T	T	T	T	T	T											T	T	T	T				T	T	T	T										T	T			G	G	G	S						S									T	.	T	S	S	S	T	T
Template Predicted Secondary structure																																																																							.
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.		.	.	.	.	.	.	.	.	240	.
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.		.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure																																																				.
Query SS confidence																																																				.
Query Sequence		G	I	A	G	D	Q	Q	A	A	L	F	G	Q	L	C	V	K	E	G	M	A	K	N	T	Y	G	T	G	C	F	M	L	M	N	T	G	E	K	A	V	K	S	E	N	G	L	L	T	T	I	.	A	C	G	P	T	G	E	V	N	Y	A	L	E	G	A	V	F	M	A	G	A	S	I	Q	W	L	R	D	E
Query Conservation																																																				.
Alig confidence																																																				.
Template Conservation
Template Sequence		G	I	L	G	D	Q	Q	A	A	T	F	G	Q	A	C	F	E	V	G	Q	A	K	N	T	Y	G	T	G	N	F	L	L	L	N	T	G	T	E	K	V	M	S	K	N	G	L	L	T	T	V	C	Y	K	I	G	D	A	P	A	V	Y	A	L	E	G	S	I	A	V	T	G	S	L	V	Q	W	L	R	D	N
Template Known Secondary structure														T	T			S	T	T							S	S	S								T	T	S					S	S	S										T	T	S											S		S										T
Template Predicted Secondary structure
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400
Predicted Secondary structure
Query SS confidence
Query Sequence		M	K	L	I	N	D	A	Y	D	S	E	Y	F	A	T	K	V	Q	N	T	N	G	V	Y	V	V	P	A	F	T	G	L	G	A	P	Y	W	D	P	Y	A	R	G	A	I	F	G	L	T	R	G	V	N	A	N	H	I	I	R	A	T	L	E	S	I	A	Y	Q	T	R	D	V	L	E	A	M	Q	A	D	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	G	M	F	E	D	A	P	D	V	E	W	L	A	G	K	V	Q	D	N	G	G	A	Y	F	V	P	A	F	S	G	L	F	A	P	Y	W	R	P	D	A	R	G	A	L	V	G	L	T	R	Y	V	N	R	N	H	I	A	R	A	A	L	E	A	T	A	F	Q	S	R	E	V	V	D	A	M	N	A	D	S
Template Known Secondary structure		T		T	T	T	T		S		T					T	T	S	S	S		T	T						T	T				S	T	T	T					S									S	S
Template Predicted Secondary structure
Template SS confidence
		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.
		401	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480
Predicted Secondary structure
Query SS confidence
Query Sequence		G	I	R	L	H	A	L	R	V	D	G	G	A	V	A	N	N	F	L	M	Q	F	Q	S	D	I	L	G	T	R	V	E	R	P	E	V	R	E	V	T	A	L	G	A	A	Y	L	A	G	L	A	V	G	F	W	Q	N	L	D	E	L	Q	E	K	A	V	I	E	R	E	F	R	P	G	I	E	T	T	E	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	V	D	L	T	E	L	R	V	D	G	G	M	V	A	N	E	L	L	M	Q	F	Q	A	D	Q	L	G	V	D	V	V	R	P	K	V	A	E	T	T	A	L	G	A	A	Y	A	A	G	I	A	V	G	F	W	K	G	E	Q	D	V	I	D	N	W	A	E	D	K	R	W	S	P	S	M	E	S	G	E	R
Template Known Secondary structure		S										S	G	G	G	G													T	S						S		S																T	S	S		S																		S
Template Predicted Secondary structure
Template SS confidence
		402	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.
		481	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	Y	R	Y	A	G	W	K	K	A	V	K	R	A	M	A	W	E	E	H	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	R	L	Y	R	N	W	K	K	A	V	T	K	T	M	E	W	V	D	E	D
Template Known Secondary structure																					T
Template Predicted Secondary structure
Template SS confidence
		482	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.