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Job DescriptionP75792
Confidence98.55%DateThu Jan 5 12:14:12 GMT 2012
Rank97Aligned Residues163
% Identity21%Templated2vkqa1
SCOP infoHAD-like HAD-like Pyrimidine 5'-nucleotidase (UMPH-1)
Resolution2.5

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10........
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Query Sequence  MSVKVIVTDMDGTFLNDA. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  AAKLQIITDFDMTLSRFSYKGKRCPTCHNIIDNCKLVTDECRKKLLQLKEKYYAIEVDPVLTVEEKYPYMVEWYTKSHGL
Template Known Secondary structure  GGG

TTTTB
STT


TSTTS
T
SSS
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   1920.........30.........40.........50.........60.... .....70........
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Query Sequence  . . . . . . . . . . . . . . . . . . KTYNQPRFMAQYQELKKRGIKFVVASGNQYYQLISFFPELKDEISF. . VAENGALVYEHGKQ
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Template Sequence  LVQQALPKAKLKEIVAESDVMLKEGYENFFDKLQQHSIPVFIFSAGIGDVLEEVIRQAGVYHPNVKVVSNFMDFDETGVL
Template Known Secondary structure  T
BGGGTS


B
BTTT

TT


TT

TTSB
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   110.........120.........130.........140.........150.........160.........170.........180.........
 
   7980.........90.........100.........110.........120.........130.........140.........150........
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Query Sequence  LFHGELTRHESRIVIGELLKDKQLNFVACGLQSAYVSENAPEAFVALMAKHYHRLKPVKDYQEIDDVLFKFSLNLPDEQI
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Template Sequence  KGFKGE. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure 
SS..........................................................................
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   159160.........170.........180.........190.........200..... ....210.........220....... ..230
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Query Sequence  PLVIDKLHVALDGIMKPVTSGFGFIDLIIPGLHKANGISRLLKRWDL. SPQNVVAIGDSGNDAEMLKMAR. . . . . . . YSF
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . LIHVFNKHDGALRNTEYFNQLKDNSNIILLGDSQGDLRMADGVANVEHILKIGY
Template Known Secondary structure  ..........................


TT
TTTTT

SSSGGGGTTTT
S

S
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   196...200.........210.........220.........230.........240.........
 
   231..... ...240.........250.........260...
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Query Sequence  AMGNAA. . . ENIKQIARYATDDNNHEGALNVIQAVL
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Template Sequence  LNDRVDELLEKYMDSYDIVLVQDESLEVANSILQKI
Template Known Secondary structure 
SSTTSST

B
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   250.........260.........270.........280.....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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