Job Description P75792 Confidence 99.48% Date Thu Jan 5 12:14:12 GMT 2012 Rank 57 Aligned Residues 238 % Identity 12% Template d1vjra_ SCOP info HAD-like HAD-like NagD-like Resolution 2.40

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.		.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure				.																																																																							.	.	.	.	.	.	.
Query SS confidence				.																																																																							.	.	.	.	.	.	.
Query Sequence		M	S	.	V	K	V	I	V	T	D	M	D	G	T	F	L	N	D	A	K	T	Y	N	Q	P	R	F	M	A	Q	Y	Q	E	L	K	K	R	G	I	K	F	V	V	A	S	G	N	Q	Y	Y	Q	L	I	S	F	F	P	E	L	K	D	E	I	S	F	V	A	E	N	G	A	L	V	.	.	.	.	.	.	.
Query Conservation				.																																																																							.	.	.	.	.	.	.
Alig confidence				.																				.	.																																																		.	.	.	.	.	.	.
Template Conservation																								.	.
Template Sequence		L	D	K	I	E	L	F	I	L	D	X	D	G	T	F	Y	L	D	D	S	L	L	.	.	P	G	S	L	E	F	L	E	T	L	K	E	K	N	K	R	F	V	F	F	T	N	N	S	S	L	G	A	Q	D	Y	V	R	K	L	R	N	X	G	V	D	V	P	D	D	A	V	V	T	S	G	E	I	T	A	E
Template Known Secondary structure		G	G	G									B	T	T	T			T	T				.	.	T	T											T	T								S		T	T	S												T	T					G	G	G
Template Predicted Secondary structure																								.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.			.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
						73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.
Query SS confidence		.	.	.	.
Query Sequence		.	.	.	.	Y	E	H	G	K	Q	L	F	H	G	E	L	T	R	H	E	S	R	I	V	I	G	E	L	L	K	D	K	Q	L	N	F	V	A	C	G	L	Q	S	A	Y	V	S	E	N	A	P	E	A	F	V	A	L	M	A	K	H	Y	H	R	L	K	P	V	K	D	Y	Q	E	I	D	D	V	L	F	K
Query Conservation		.	.	.	.
Alig confidence		.	.	.	.													.	.	.	.	.	.
Template Conservation																		.	.	.	.	.	.
Template Sequence		H	X	L	K	R	F	G	R	C	R	I	F	L	L	G	T	.	.	.	.	.	.	P	Q	L	K	K	V	F	E	A	Y	G	H	V	I	D	E	E	N	P	D	F	V	V	L	G	F	D	K	T	L	T	Y	E	R	L	K	K	A	C	I	L	L	R	K	G	K	F	Y	I	A	T	H	P	D	I	N	C	P
Template Known Secondary structure									S							S		.	.	.	.	.	.										T	T					S	S	S		S								T	T														T	T	T						S				S
Template Predicted Secondary structure																		.	.	.	.	.	.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.							.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.		.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure																																																																							.
Query SS confidence																																																																							.
Query Sequence		F	S	L	N	L	P	D	E	Q	I	P	L	V	I	D	K	L	H	V	A	L	D	G	I	M	K	P	V	T	S	G	F	G	F	I	D	L	I	I	P	G	L	H	K	A	N	G	I	S	R	L	L	K	R	W	D	L	S	P	Q	N	V	V	A	I	G	D	S	G	.	N	D	A	E	M	L	K	M	A	R
Query Conservation																																																																							.
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.																																				.
Template Conservation																								.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	K	E	G	P	V	P	D	A	G	S	I	X	A	A	I	E	A	S	T	G	R	.	.	.	.	.	.	.	.	.	.	.	.	K	P	D	L	I	A	G	K	P	N	P	L	V	V	D	V	I	S	E	K	F	G	V	P	K	E	R	X	A	X	V	G	D	R	L	Y	T	D	V	K	L	G	K	N	A	G
Template Known Secondary structure			T	T	S																	S		.	.	.	.	.	.	.	.	.	.	.	.			S				S	T	T	S	T											T			G	G	G						S													T
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.													.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
		228								.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
Predicted Secondary structure			.	.	.	.	.	.	.
Query SS confidence			.	.	.	.	.	.	.
Query Sequence		Y	.	.	.	.	.	.	.	S	F	A	M	G	N	A	A	E	N	I	K	Q	I	A	R	Y	A	T	D	D	N	N	H	E	G	A	L	N	V	I	Q
Query Conservation			.	.	.	.	.	.	.
Alig confidence			.	.	.	.	.	.	.																									.	.
Template Conservation																																		.	.
Template Sequence		I	V	S	I	L	V	L	T	G	E	T	T	P	E	D	L	E	R	A	E	T	K	P	D	F	V	F	K	N	L	G	E	.	.	L	A	K	A	V	Q
Template Known Secondary structure								S	S	S	S										S	S			S				S	S				.	.
Template Predicted Secondary structure																																		.	.
Template SS confidence
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.			.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions