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Job DescriptionP75792
Confidence98.29%DateThu Jan 5 12:14:12 GMT 2012
Rank112Aligned Residues203
% Identity12%Templatec3s6jC_
PDB info PDB header:hydrolaseChain: C: PDB Molecule:hydrolase, haloacid dehalogenase-like family; PDBTitle: the crystal structure of a hydrolase from pseudomonas syringae
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10.........20.........30.........40.........50.........60.........70.........80....
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Query Sequence  VIVTDMDGTFLNDAKTYNQPRFMAQYQELKKRGIKFVVASGNQYYQLISFFPELKDEISFVAENGALVYEHGKQLFHGEL
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Template Sequence  SFIFDLDGTLTDS. . . . . VYQNVAAWKEALDAE. . . . . . . NIPLAXWRIHRKIGXSGGLXTGXSI. . . . . . . . . . . . . . .
Template Known Secondary structure 

BTTT
.....T.......T



TTTTS
TTT





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   109110.........120. ........130...... ...140.........150.........160.
 
   85....90.........100.........110.........120.........130.........140.........150.........160....
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Query Sequence  TRHESRIVIGELLKDKQLNFVACGLQSAYVSENAPEAFVALMAKHYHRLKPVKDYQEIDDVLFKFSLNLPDEQIPLVIDK
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Template Sequence  . TDEQAERLSEKHA. . . . . . . . . . . . . . . . . . . QAYERLQHQIIALPGAVELLETLDKENLKWCIATSGGIDTATINLKA
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...................TTGGG

TTTT


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   169170.........180. ........190.........200.........210.........220........
 
   165....170.........180.........190.........200.........210.........220.........230. ........240
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Query Sequence  LHVALDGIMKPVTSGFGFIDLIIPGLHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFA. . . . MGNAAENIK
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Template Sequence  LKLDINKINIVT. . . . . . RDDVSYGKPDPDLFLAAAKKIGAPIDECLVIGDAIWDXLAARRCKATGVGLLSGGYDIGELE
Template Known Secondary structure  TT

GGGS

......GGGSSS
TTSSTT

GGGSSTT
GGGS

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   229230.........240 .........250.........260.........270.........280.........290.........300..
 
   241. .......250.........260..
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Query Sequence  QI. ARYATDDNNHEGALNVIQAV
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Template Sequence  RAGALRVYEDPLD. . LLNHLDEI
Template Known Secondary structure  TT
SSS..TTGGGT
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   303......310..... ....320...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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