Job Description P75792 Confidence 99.79% Date Thu Jan 5 12:14:12 GMT 2012 Rank 43 Aligned Residues 196 % Identity 17% Template c3m1yA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:phosphoserine phosphatase (serb); PDBTitle: crystal structure of a phosphoserine phosphatase (serb) from2 helicobacter pylori Resolution 2.40 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	S	V	K	V	I	V	T	D	M	D	G	T	F	L	N	D	A	K	T	Y	N	Q	P	R	F	M	A	Q	Y	Q	E	L	K	K	R	G	I	K	F	V	V	A	S	G	N	Q	Y	Y	Q	L	I	S	F	F	P	E	L	K	D	E	I	S	F	V	A	E	N	G	A	L	V	Y	E	H	G	K	Q	L	F
Query Conservation
Alig confidence				.																.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation				.																.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	Q	.	K	L	A	V	F	D	F	D	S	T	L	V	N	A	E	.	.	.	.	.	.	.	T	I	E	S	L	A	R	A	W	G	V	F	D	E	V	K	T	I	T	L	K	E	T	D	F	H	K	S	L	I	L	R	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure				.								B	T	T	T	B	S	S		.	.	.	.	.	.	.									T	T						T	T																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure				.																.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.		.	.	.	.	.	.	.	10	.	.	.	.	.	.	.								.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		H	G	E	L	T	R	H	E	S	R	I	V	I	G	E	L	L	K	D	K	Q	L	N	F	V	A	C	G	L	Q	S	A	Y	V	S	E	N	A	P	E	A	F	V	A	L	M	A	K	H	Y	H	R	L	K	P	V	K	D	Y	Q	E	I	D	D	V	L	F	K	F	S	L	N	L	P	D	E	Q	I	P	L
Query Conservation
Alig confidence		.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	S	K	L	K	N	X	P	L	K	L	A	K	E	V	C	E	S	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	L	F	E	G	A	L	E	L	V	S	A	L	K	E	K	N	Y	K	V	V	C	F	S	G	G	F	D	L	A	T	N	H
Template Known Secondary structure		.	.		T	T	T	T		B									T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		B		B	T										T	T	T
Template Predicted Secondary structure		.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
				55	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.																												.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.					.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.
Query SS confidence																								.	.	.	.
Query Sequence		V	I	D	K	L	H	V	A	L	D	G	I	M	K	P	V	T	S	G	F	G	F	.	.	.	.	I	D	L	I	I	P	G	L	H	K	A	N	G	I	S	R	L	L	K	R	W	D	L	S	P	Q	N	V	V	A	I	G	D	S	G	N	D	A	E	M	L	K	M	A	R	Y	S	F	A	M	G	N	A	A
Query Conservation																								.	.	.	.
Alig confidence																								.	.	.	.																																																			.
Template Conservation																																																																														.
Template Sequence		Y	R	D	L	L	H	L	D	A	A	F	S	N	T	L	I	V	E	N	D	A	L	N	G	L	V	T	G	H	X	X	F	S	H	S	K	G	E	X	L	L	V	L	Q	R	L	L	N	I	S	K	T	N	T	L	V	V	G	D	G	A	N	D	L	S	X	F	K	H	A	H	I	K	I	A	F	.	N	A	K
Template Known Secondary structure							T		S											T	T									S			S	T	T														T			S	T	T							S	G	G	G					T	T		S						.	S
Template Predicted Secondary structure																																																																														.
Template SS confidence
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.		.	.	.
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	N	I	K	Q	I	A	R	Y	A	T	D	D	N	N	H	E	G	A	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	V	L	K	Q	H	A	T	H	C	I	N	E	P	D	L	A	L	I	K
Template Known Secondary structure						T	T		S					S	S	B	G	G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions