Return to main results Retrieve Phyre Job Id

Job DescriptionP75792
Confidence97.57%DateThu Jan 5 12:14:12 GMT 2012
Rank132Aligned Residues115
% Identity20%Templatec3ib6B_
PDB info PDB header:structural genomics, unknown functionChain: B: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of an uncharacterized protein from listeria2 monocytogenes serotype 4b
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20.. .......30.........40.... .....50.........60.........
Predicted Secondary structure 












.............




...














Query SS confidence 
















. . . . . . . . . . . . .





















. . .
























Query Sequence  IVTDMDGTFLNDAKTYN. . . . . . . . . . . . . QPRFMAQYQELKKRGIKFVVAS. . . GNQYYQLISFFPELKDEISFVAENG
Query Conservation 
  





        .............       
  
   
    
 
...

           
      
  

Alig confidence 
















.............





















...
























Template Conservation     
 
 

                    
 
 
 
 
  

  
  
 
 

            
        

    
Template Sequence  VIWDMGETLNTVPNTRYDHHPLDTYPEVVLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGIIDYFDFIYA
Template Known Secondary structure 
TBTTTB


TTSS
SS
GGG
SS

B
TTTT


SS

TT
GGG
Template Predicted Secondary structure 
























Template SS confidence 















































































   5....10.........20.........30.........40.........50.........60.........70.........80....
 
   70.........80.........90.........100.........110.........120.........130.........140.........
Predicted Secondary structure 




























Query SS confidence 















































































Query Sequence  ALVYEHGKQLFHGELTRHESRIVIGELLKDKQLNFVACGLQSAYVSENAPEAFVALMAKHYHRLKPVKDYQEIDDVLFKF
Query Conservation 
 
      
                                                                      
Alig confidence 








.......................................................................
Template Conservation           .......................................................................
Template Sequence  SNSELQPGK. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure 

TTSSSS
.......................................................................
Template Predicted Secondary structure 





.......................................................................
Template SS confidence 















































































   85....90...
 
   150.........160.........170.........180.........190.. .......200.........210....... ..220......
Predicted Secondary structure 















..








.

Query SS confidence 










































. .
























.








Query Sequence  SLNLPDEQIPLVIDKLHVALDGIMKPVTSGFGFIDLIIPGLHK. . ANGISRLLKRWDLSPQNVVAIGDSG. NDAEMLKMA
Query Conservation                                     
      
..      
          

  

  .

  

  
Alig confidence  ........................................


..
























.








Template Conservation  ........................................  

 
         
   
 
 
 



   

  
  
Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . MEKPDKTIFDFTLNALQIDKTEAVMVGNTFESDIIGANRA
Template Known Secondary structure  ........................................

TT
T

GGGSBTTTTT
Template Predicted Secondary structure  ........................................












Template SS confidence 















































































   94.....100.........110.........120.........130...
 
   227..230.
Predicted Secondary structure 

Query SS confidence 




Query Sequence  RYSFA
Query Conservation     

Alig confidence 




Template Conservation 

  
Template Sequence  GIHAI
Template Known Secondary structure  T
Template Predicted Secondary structure 

Template SS confidence 




   134....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions