Job Description P75792 Confidence 87.78% Date Thu Jan 5 12:14:12 GMT 2012 Rank 154 Aligned Residues 65 % Identity 12% Template c3ef0A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:rna polymerase ii subunit a c-terminal domain PDBTitle: the structure of fcp1, an essential rna polymerase ii ctd2 phosphatase Resolution 2.10 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.																																								.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	V	K	V	I	V	T	D	M	D	G	T	F	L	N	D	A	K	T	Y	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	P	R	F	M	A	Q	Y	Q	E	L	K	K	R	G	I	K	F	V	V
Query Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.
Template Conservation																																																																												.
Template Sequence		K	R	L	S	L	I	V	D	L	D	Q	T	I	I	H	A	T	V	D	P	T	V	G	E	W	M	S	D	P	G	N	V	N	Y	D	V	L	R	D	V	R	S	F	N	L	Q	E	G	P	S	G	Y	T	S	C	Y	Y	I	K	F	R	P	G	L	A	Q	F	L	Q	K	I	S	E	L	.	Y	E	L	H	I
Template Known Secondary structure		T									B	T	T	T							T							T		T	T	S	T	T	T	G	G	G	T	T									T	T	T	T											T	T										T	T	.
Template Predicted Secondary structure																																																																												.
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.		.	.	.	240	.
		43	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	S	G	N	Q	Y	Y	Q	L	I	S	F	F	P	E	L	K	D	E	I	S	F	V	A	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	T	M	G	T	K	A	Y	A	K	E	V	A	K	I	I	D	P	T	G	K	L	F	Q	D
Template Known Secondary structure				S	S														T	T	S		S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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