Job Description P75792 Confidence 97.77% Date Thu Jan 5 12:14:12 GMT 2012 Rank 126 Aligned Residues 219 % Identity 13% Template c3ed5A_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:yfnb; PDBTitle: the crystal structure of yfnb from bacillus subtilis subsp. subtilis2 str. 168 Resolution 1.72 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.		.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																																					.
Query SS confidence																																					.
Query Sequence		S	V	K	V	I	V	T	D	M	D	G	T	F	L	N	D	A	K	T	Y	N	Q	P	R	F	M	A	Q	Y	Q	E	L	K	K	R	.	G	I	K	F	V	V	A	S	G	N	Q	Y	Y	Q	L	I	S	F	F	P	E	L	K	D	E	I	S	F	V	A	E	N	G	A	L	V	Y	E	H	G	K	Q	L	F
Query Conservation																																					.
Alig confidence																		.	.	.	.	.															.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.	.	.	.	.																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	Y	R	T	L	L	F	D	V	D	D	T	I	L	D	F	.	.	.	.	.	Q	A	A	E	A	L	A	L	R	L	L	F	E	D	Q	N	I	P	L	T	N	D	X	K	A	Q	Y	K	T	I	N	Q	G	L	W	R	A	F	E	E	G	K	X	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure											B	T	T	T	B			.	.	.	.	.															T	T																								T	T	S	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																		.	.	.	.	.																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.						.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.			.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																.	.
Query SS confidence																																																																.	.
Query Sequence		H	G	E	L	T	R	H	E	S	R	I	V	I	G	E	L	L	K	D	K	Q	L	N	F	V	A	C	G	L	Q	S	A	Y	V	S	E	N	A	P	E	A	F	V	A	L	M	A	K	H	Y	H	R	L	K	P	V	K	D	Y	Q	E	I	.	.	D	D	V	L	F	K	F	S	L	N	L	P	D	E	Q	I
Query Conservation																																																																.	.
Alig confidence		.	.	.	.																				.	.	.	.	.	.	.	.	.																															.	.
Template Conservation		.	.	.	.																				.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	R	D	E	V	V	N	T	R	F	S	A	L	L	K	E	Y	G	Y	E	.	.	.	.	.	.	.	.	.	A	D	G	A	L	L	E	Q	K	Y	R	R	F	L	E	E	G	H	Q	L	I	D	G	A	F	D	L	I	S	N	L	Q	Q	Q	F	D	L	Y	I	V	T	N	G	V	S	H	T	Q
Template Known Secondary structure		.	.	.	.																T	T			.	.	.	.	.	.	.	.	.															T	T				B		T	T										T	T	S								S
Template Predicted Secondary structure		.	.	.	.																				.	.	.	.	.	.	.	.	.
Template SS confidence
						63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.										.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.		.	.	.	220	.	.	.	.	.	.	.	.	.	230	.				.	.	.
Predicted Secondary structure																																																												.																.	.	.
Query SS confidence																																																												.																.	.	.
Query Sequence		P	L	V	I	D	K	L	H	V	A	L	D	G	I	M	K	P	V	T	S	G	F	G	F	I	D	L	I	I	P	G	L	H	K	A	N	G	I	S	R	L	L	K	R	W	D	L	S	P	Q	N	V	V	A	I	G	D	S	.	G	N	D	A	E	M	L	K	M	A	R	Y	S	F	A	.	.	.	M	G	N
Query Conservation																																																												.																.	.	.
Alig confidence																					.	.	.	.	.																																			.																.	.	.
Template Conservation																					.	.	.	.	.
Template Sequence		Y	K	R	L	R	D	S	G	L	F	P	F	F	K	D	I	F	V	S	.	.	.	.	.	E	D	T	G	F	Q	K	P	X	K	E	Y	F	N	Y	V	F	E	R	I	P	Q	F	S	A	E	H	T	L	I	I	G	D	S	L	T	A	D	I	K	G	G	Q	L	A	G	L	D	T	C	W	X	N	P	D	X
Template Known Secondary structure								T	T		G	G	G		S					G	.	.	.	.	.	G	G	T	T	S		T	T											T	S	T	T			G	G	G						S		T	T	T	T							T	T								T	T
Template Predicted Secondary structure																					.	.	.	.	.
Template SS confidence
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.						.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	E	N	I	K	Q	I	A	R	Y	A	T	D	D	N	N	H	E	G	A	L	N	V	I	Q
Query Conservation
Alig confidence																				.	.
Template Conservation																				.	.
Template Sequence		K	P	N	V	P	E	I	I	P	T	Y	E	I	R	K	L	E	E	.	.	L	Y	H	I	L	N
Template Known Secondary structure					T	T					S				S	S	G	G	G	.	.						T
Template Predicted Secondary structure																				.	.
Template SS confidence
		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.			.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions