Return to main results Retrieve Phyre Job Id

Job DescriptionP75792
Confidence32.43%DateThu Jan 5 12:14:12 GMT 2012
Rank165Aligned Residues54
% Identity13%Templatec3bezC_
PDB info PDB header:hydrolaseChain: C: PDB Molecule:protease 4; PDBTitle: crystal structure of escherichia coli signal peptide peptidase (sppa),2 semet crystals
Resolution2.76 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10.........20.........30....... ..40.... .....50........
Predicted Secondary structure 















....

..



Query SS confidence 
































. . . .






. .













Query Sequence  VIVTDMDGTFLNDAKTYNQPRFMAQYQELKKRG. . . . IKFVVAS. . GNQYYQLISFFPEL
Query Conservation 

  





               
  
   
....    
 
..

           
Alig confidence 
































....






..













Template Conservation 



 
 
 
       
   
   
  
  
  
 



 
 
  

  
   

   
Template Sequence  ALLLDISGVIVDKPQENSLFDIVNTIRQAKDDRNITGIVXDLKNFAGGDQPSXQYIGKAL
Template Known Secondary structure 


S



TT
TT

Template Predicted Secondary structure 






















Template SS confidence 



























































   58.60.........70.........80.........90.........100.........110.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions