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Job DescriptionP75792
Confidence99.31%DateThu Jan 5 12:14:12 GMT 2012
Rank66Aligned Residues169
% Identity16%Templatec3b8eC_
PDB info PDB header:hydrolase/transport proteinChain: C: PDB Molecule:sodium/potassium-transporting atpase subunit PDBTitle: crystal structure of the sodium-potassium pump
Resolution3.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   22.......30.........40.........50.........60.........70.........80.........90.........100.
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Query Sequence  NQPRFMAQYQELKKRGIKFVVASGNQYYQLISFFPELKDEISFVAENGALVYEHGKQLFHGELTRHESRIVIGELLKDKQ
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Template Sequence  PRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEG. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  B
SSTT

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   588.590.........600.........610.........620.........630
 
   102.......110.........120.........130.........140.........150.........160.........170.........180.
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Query Sequence  LNFVACGLQSAYVSENAPEAFVALMAKHYHRLKPVKDYQEIDDVLFKFSLNLPDEQIPLVIDKLHVALDGIMKPVTSGFG
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . NETVEDIAARLNIPVSQVNPRDAKACVVHGSDLKDMTSEQLDDILKYHTEIVFAR. . . .
Template Known Secondary structure  .....................BTTSSSSSSTTTTTTTT

SB
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   631........640.........650.........660.........670.........680.....
 
   182.......190.........200.........210.........220.........230... ......240.........250.........260
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Query Sequence  FIDLIIPGLHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMG. NAAENIKQIARYATDDNNHEGALNVIQ
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Template Sequence  . . . . . . . . . TSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPASKKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVE
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TTT



SGGGTTSS

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   686...690.........700.........710.........720.........730.........740.........750......
 
   261
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Query Sequence  A
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Template Conservation   
Template Sequence  E
Template Known Secondary structure 
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   757
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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