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Job DescriptionP75792
Confidence99.93%DateThu Jan 5 12:14:12 GMT 2012
Rank31Aligned Residues147
% Identity30%Templatec2r8zC_
PDB info PDB header:hydrolaseChain: C: PDB Molecule:3-deoxy-d-manno-octulosonate 8-phosphate phosphatase; PDBTitle: crystal structure of yrbi phosphatase from escherichia coli in complex2 with a phosphate and a calcium ion
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20... ......30.........40.........50.........60.........70..
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Query Sequence  SVKVIVTDMDGTFLNDAKTYNQ. . . . . . . . . PRFMAQYQELKKRGIKFVVASGNQYYQLISFFPELKDEISFVAENGALV
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Template Sequence  NIRLLILDVDGVLSDGLIYMGNNGEELKAFNVRDGYGIRCALTSDIEVAIITGRKAKLVEDRCATL. . . . . . . . . . . . . .
Template Known Secondary structure  T
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   25....30.........40.........50.........60.........70.........80.........90
 
   73......80.........90.........100.........110.........120.........130.........140.........150..
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Query Sequence  YEHGKQLFHGELTRHESRIVIGELLKDKQLNFVACGLQSAYVSENAPEAFVALMAKHYHRLKPVKDYQEIDDVLFKFSLN
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   153......160.........170.........180.........190.........200.........210.........220.........230..
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Query Sequence  LPDEQIPLVIDKLHVALDGIMKPVTSGFGFIDLIIPGLHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAM
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . GITHLYQGQSNKLIAFSDLLEKLAIAPENVAYVGDDLIDWPVMEKVGLSVAV
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GGGSSGGGTTSS
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   91........100.........110.........120.........130.........140..
 
   233......240.........250...... ...260.........270
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Query Sequence  GNAAENIKQIARYATDDNNHEGAL. NVIQAVLDNTSPFN
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Template Sequence  ADAHPLLIPRADYVTRIAGGRGAVREVCDLLLLAQGKLD
Template Known Secondary structure  TTS
TTTGGGSS
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   143......150.........160.........170.........180.
 
Download:Text version

No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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