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Job DescriptionP75792
Confidence97.68%DateThu Jan 5 12:14:12 GMT 2012
Rank127Aligned Residues145
% Identity18%Templatec2odaB_
PDB info PDB header:protein bindingChain: B: PDB Molecule:hypothetical protein pspto_2114; PDBTitle: crystal structure of pspto_2114
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10..... ....20.........30.........40.........50.........60.........70...
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Query Sequence  IVTDMDGTFL. . . . . . . . . . . . NDAKTYNQPRFMAQYQELKKRGIKFVVASGNQYYQLISFFPELKDEISFVAENGALVY
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Template Sequence  LLFGLSGCLVDFGAQAATSDTPDDEHAQLTPGAQNALKALRDQGXPCAWIDELPEALSTPLAAPVN. . DWXIA. . . . . . .
Template Known Secondary structure  TBTTTB
TT
GGGG
SS

GGGGSB
TTT



S
TTTTT..TT
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   910.........20.........30.........40.........50.........60.........70.... .....
 
   74.....80.........90.........100.........110.........120.........130.........140.........150...
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Query Sequence  EHGKQLFHGELTRHESRIVIGELLKDKQLNFVACGLQSAYVSENAPEAFVALMAKHYHRLKPVKDYQEIDDVLFKFSLNL
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Query Sequence  PDEQIPLVIDKLHVALDGIMKPVTSGFGFIDLIIPGLHKANGISRLLKRWDLSP. QNVVAIGDSGNDAEMLKMAR. . . YS
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . APRPTAGWPQPDACWXALXALNVSQLEGCVLISGDPRLLQSGLNAGLWTIG
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SS
TTSTTT
S
STT
S
TT
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   80.........90.........100.........110.........120.........130
 
   230. ........240.. .......250.. .......260........
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Query Sequence  FA. . . . . MGNAAENIKQI. . . . . . . . . . . . . . . . . . . . ARYATDDNNH. EGALNVIQAVLDNTSP
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Template Sequence  LASCGPLCGLSPSQWQALNNAEREQRRAQATLKLYSLGVHSVIDHLGELESCLADIALRRSKGEK
Template Known Secondary structure  SSSSTTT


S
T
SSSGGGTT

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   131........140.........150.........160.........170.........180.........190.....
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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