Job Description P75792 Confidence 99.38% Date Thu Jan 5 12:14:12 GMT 2012 Rank 62 Aligned Residues 153 % Identity 18% Template c1mhsA_ PDB info PDB header:membrane protein, proton transport Chain: A: PDB Molecule:plasma membrane atpase; PDBTitle: model of neurospora crassa proton atpase Resolution 8.00 Å

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	T	F	L	N	D	A	K	T	Y	N	Q	P	R	F	M	A	Q	Y	Q	E	L	K	K	R	G	I	K	F	V	V	A	S	G	N	Q	Y	Y	Q	L	I	S	F	F	P	E	L	K	D	E	I	S	F	V	A	E	N	G	A	L	V	Y	E	H	G	K	Q	L	F	H	G	E	L	T	R	H	E	S	R	I
Query Conservation
Alig confidence										.	.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation										.	.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	I	M	P	C	M	D	P	.	.	P	R	H	D	T	Y	K	T	V	C	E	A	K	T	L	G	L	S	I	K	M	L	T	G	D	A	V	G	I	A	R	E	T	S	R	Q	L	G	L	G	T	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		B	B							.	.																T								S	S													T	S	S		S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure										.	.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		528	.	530	.	.	.	.	.			.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	I	G	E	L	L	K	D	K	Q	L	N	F	V	A	C	G	L	Q	S	A	Y	V	S	E	N	A	P	E	A	F	V	A	L	M	A	K	H	Y	H	R	L	K	P	V	K	D	Y	Q	E	I	D	D	V	L	F	K	F	S	L	N	L	P	D	E	Q	I	P	L	V	I	D	K	L	H	V	A	L	D	G
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	Y	N	A	E	R	L	G	L	G	G	G	G	D	M	P	G	S	E	V	Y	D	F	V	E	A	A	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				S	S	S	S	S	S		B				G	G	G	G	G	G	G	T	T	T	T	T	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																	578	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	M	K	P	V	T	S	G	F	G	F	I	D	L	I	I	P	G	L	H	K	A	N	G	I	S	R	L	L	K	R	W	D	L	S	P	Q	N	V	V	A	I	G	D	S	G	N	D	A	E	M	L	K	M	A	R	Y	S	F	A	M	G	N	A	A	E	N	I	K	Q	I	A	R	Y	A	T	D	D	N	N
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.								.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.								.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	G	F	A	E	V	F	P	.	.	.	.	.	.	Q	H	K	Y	N	V	V	E	I	L	Q	Q	R	G	Y	L	V	A	M	T	G	D	G	V	N	D	A	P	S	L	K	K	A	D	T	G	I	A	V	E	G	S	S	D	A	A	R	S	A	A	D	I	V	F	L	A	P	G
Template Known Secondary structure		.	.	.	.	.	.	.	.	.				S			S	.	.	.	.	.	.	T											T	T	T										G	G	G							S	S						T	T	S							S	S	S				S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.								.	.	.	.	.	.
Template SS confidence
											606	.	.	.	610	.	.							.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670
		252	.	.	.	.	.	.	.	260	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	E	G	A	L	N	V	I	Q	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	G	A	I	I	D	A	L	K	T
Template Known Secondary structure		S
Template Predicted Secondary structure
Template SS confidence
		671	.	.	.	.	.	.	.	.	680

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions