Job Description P0A6D0 Confidence 92.88% Date Thu Jan 5 11:02:51 GMT 2012 Rank 23 Aligned Residues 71 % Identity 18% Template d2d1ha1 SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain TrmB-like Resolution 2.05

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.				.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure																																																.	.	.
Query SS confidence																																																.	.	.
Query Sequence		E	E	L	V	K	A	F	K	A	L	L	K	E	E	K	F	S	S	Q	G	E	I	V	A	A	L	Q	E	Q	G	F	D	N	I	N	Q	S	K	V	S	R	M	L	T	K	F	.	.	.	G	A	V	R	T	R	N	A	K	M	E	M	V	Y	C	L	P	A	E	L	G	V	P	T	T	S	S	P	L	K	N
Query Conservation																																																.	.	.
Alig confidence																												.	.	.	.	.		.														.	.	.							.									.
Template Conservation																												.	.	.	.	.		.																							.									.
Template Sequence		D	T	D	V	A	V	L	L	K	X	V	E	I	E	K	P	I	T	S	E	E	L	A	D	I	F	.	.	.	.	.	K	.	L	S	K	T	T	V	E	N	S	L	K	K	L	I	E	L	G	L	V	V	R	T	.	K	T	P	K	Y	Y	Y	S	.	I	S	S	N	I	L	E	K	I	R	N	D	L	L	N
Template Known Secondary structure																S												.	.	.	.	.	T	.																T	T	S					.									.			T	T
Template Predicted Secondary structure																												.	.	.	.	.		.																							.									.
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.						.		.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.		70	.	.	.	.	.	.	.		.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
		85	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		C	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		100	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions