Return to main results Retrieve Phyre Job Id

Job DescriptionP0A6D0
Confidence62.90%DateThu Jan 5 11:02:51 GMT 2012
Rank60Aligned Residues66
% Identity23%Templated1sfxa_
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain TrmB-like
Resolution1.55

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   14.....20.........30.........40.........50... ..... .60.........70.........80.....
Predicted Secondary structure 










...

.










Query SS confidence 







































. . .




.


























Query Sequence  FKALLKEEKFSSQGEIVAALQEQGFDNINQSKVSRMLTKF. . . GAVRT. RNAKMEMVYCLPAELGVPTTSSPLKNL
Query Conservation 
  

    
 




   
   
   












... 



.    
   
 

               
Alig confidence 



















......













...




.


























Template Conservation 

  
      
  


   ...... 
    

  
  
   


 
      
   

      
 
  
   
Template Sequence  IYSLLLERGGXRVSEIAREL. . . . . . DLSARFVRDRLKVLLKRGFVRREIVEKGWVGYIYSAEKPEKVLKEFKSSI
Template Known Secondary structure 

B
......T

TTSSSS

Template Predicted Secondary structure 






......

















Template SS confidence 











































































   24.....30.........40... ......50.........60.........70.........80.........90...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions