Job Description P0A6D0 Confidence 46.71% Date Thu Jan 5 11:02:51 GMT 2012 Rank 83 Aligned Residues 68 % Identity 13% Template d1p6ra_ SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Penicillinase repressor Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.		.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.
Predicted Secondary structure																																						.
Query SS confidence																																						.
Query Sequence		M	R	S	S	A	K	Q	E	E	L	V	K	A	F	K	A	L	L	K	E	E	K	F	S	S	Q	G	E	I	V	A	A	L	Q	E	Q	.	G	F	D	N	I	N	Q	S	K	V	S	R	M	L	T	K	F	G	A	V	R	T	R	N	A	K	M	E	M	V	Y	C
Query Conservation																																						.
Alig confidence																																						.
Template Conservation
Template Sequence		M	K	K	I	P	Q	I	S	D	A	E	L	E	V	M	K	V	I	W	K	H	S	S	I	N	T	N	E	V	I	K	E	L	S	K	T	S	T	W	S	P	K	T	I	Q	T	M	L	L	R	L	I	K	K	G	A	L	N	H	H	K	E	G	R	V	F	V	Y	T
Template Known Secondary structure																					T	S	S	S														S																	T	T	S							T	T
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions