Return to main results Retrieve Phyre Job Id

Job DescriptionP0A6D0
Confidence99.94%DateThu Jan 5 11:02:51 GMT 2012
Rank4Aligned Residues76
% Identity100%Templated1aoya_
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Arginine repressor (ArgR), N-terminal DNA-binding domain
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70......
Predicted Secondary structure 



























Query SS confidence 











































































Query Sequence  MRSSAKQEELVKAFKALLKEEKFSSQGEIVAALQEQGFDNINQSKVSRMLTKFGAVRTRNAKMEMVYCLPAELGVP
Query Conservation 
 
  

   
  
  

    
 




   
   
   












 



    
   
 

      
Alig confidence 











































































Template Conservation 
 

 

   
  

 

    
 

 

   
   
   









 

  


    
   
 

 
   
Template Sequence  MRSSAKQEELVKAFKALLKEEKFSSQGEIVAALQEQGFDNINQSKVSRMLTKFGAVRTRNAKMEMVYCLPAELGVP
Template Known Secondary structure 





STTT



ST
SS

T

TTS


SS


S
Template Predicted Secondary structure 






























Template SS confidence 











































































   1........10.........20.........30.........40.........50.........60.........70......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions