Job Description P0A6D0 Confidence 79.94% Date Thu Jan 5 11:02:51 GMT 2012 Rank 45 Aligned Residues 125 % Identity 13% Template c2vbzA_ PDB info PDB header:dna-binding protein Chain: A: PDB Molecule:transcriptional regulatory protein; PDBTitle: feast or famine regulatory protein (rv3291c)from m.2 tuberculosis complexed with l-tryptophan Resolution 2.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	R	S	S	A	K	Q	E	E	L	V	K	A	F	K	A	L	L	K	E	E	K	F	S	S	Q	G	E	I	V	A	A	L	Q	E	Q	G	F	D	N	I	N	Q	S	K	V	S	R	M	L	T	K	F	G	A	V	R	T	R	N	A	K	M	E	M	V	Y	C	L	P	A	E	L	G	V	P	T	T	S	S
Query Conservation
Alig confidence									.	.	.	.	.	.																					.	.	.			.	.	.																					.	.	.	.	.								.	.	.	.	.	.	.
Template Conservation									.	.	.	.	.	.																					.	.	.			.	.	.																					.	.	.	.	.								.	.	.	.	.	.	.
Template Sequence		L	D	D	I	D	R	I	.	.	.	.	.	.	L	V	R	E	L	A	A	D	G	R	A	T	L	S	E	L	A	T	R	A	.	.	.	G	L	.	.	.	S	V	S	A	V	Q	S	R	V	R	R	L	E	S	R	G	V	V	Q	G	.	.	.	.	.	Y	S	A	R	I	N	P	.	.	.	.	.	.	.
Template Known Secondary structure									.	.	.	.	.	.									T	T											.	.	.	T		.	.	.															T	T	S	S			.	.	.	.	.							T	.	.	.	.	.	.	.
Template Predicted Secondary structure									.	.	.	.	.	.																					.	.	.			.	.	.																					.	.	.	.	.								.	.	.	.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.							.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.				.	.				.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.						.	.	.	.	.	.	60
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.		.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure																																																						.
Query SS confidence																																																						.
Query Sequence		P	L	K	N	L	V	L	D	I	D	Y	N	D	A	V	V	V	I	H	T	S	P	G	A	A	Q	L	I	A	R	L	L	D	S	L	G	K	A	E	G	I	L	G	T	I	A	G	D	D	T	I	F	.	T	T	P	A	N	G	F	T	V	K	D	L	Y	E	A	I	L	E	L	F	D
Query Conservation																																																						.
Alig confidence		.	.	.	.																																																	.
Template Conservation		.	.	.	.
Template Sequence		.	.	.	.	E	A	V	G	H	L	L	S	A	F	V	A	I	T	P	L	D	P	S	Q	P	D	D	A	P	A	R	L	E	H	I	E	E	V	E	S	C	Y	S	V	A	G	E	E	S	Y	V	L	L	V	R	V	A	S	A	R	A	L	E	D	L	L	Q	R	I	R	T	T	A	N
Template Known Secondary structure		.	.	.	.	G	G	G	T												S	S			S									T	T		T	T								S	S	S	S	S								S	S																T
Template Predicted Secondary structure		.	.	.	.
Template SS confidence
						61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions