Return to main results Retrieve Phyre Job Id

Job DescriptionP0A6D0
Confidence89.88%DateThu Jan 5 11:02:51 GMT 2012
Rank31Aligned Residues44
% Identity16%Templatec2it0A_
PDB info PDB header:transcription/dnaChain: A: PDB Molecule:iron-dependent repressor ider; PDBTitle: crystal structure of a two-domain ider-dna complex crystal2 form ii
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30.........40.........50...
Predicted Secondary structure 











Query SS confidence 

















































Query Sequence  SAKQEELVKAFKALLKEEKFSSQGEIVAALQEQGFDNINQSKVSRMLTKF
Query Conservation    

   
  
  

    
 




   
   
   












Alig confidence 





























...

...











Template Conservation 
   



 

  
           

  
... 
...
  

   
  
Template Sequence  VDTTEMYLRTIYDLEEEGVTPLRARIAERL. . . DQ. . . SGPTVSQTVSRM
Template Known Secondary structure  SSTT



T...T
...
Template Predicted Secondary structure 






...

...
Template SS confidence 

















































   5....10.........20.........30.... .. ...40........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions