Job Description P0A6D0 Confidence 81.19% Date Thu Jan 5 11:02:51 GMT 2012 Rank 44 Aligned Residues 120 % Identity 13% Template c2dbbA_ PDB info PDB header:transcriptional regulator Chain: A: PDB Molecule:putative hth-type transcriptional regulator ph0061; PDBTitle: crystal structure of ph0061 Resolution 2.00 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	V	K	A	F	K	A	L	L	K	E	E	K	F	S	S	Q	G	E	I	V	A	A	L	Q	E	Q	G	F	D	N	I	N	Q	S	K	V	S	R	M	L	T	K	F	G	A	V	R	T	R	N	A	K	M	E	M	V	Y	C	L	P	A	E	L	G	V	P	T	T	S	S	P	L	K	N	L	V	L	D
Query Conservation
Alig confidence																											.	.	.			.	.	.																					.	.	.	.	.													.	.	.	.	.	.	.	.	.	.
Template Conservation																											.	.	.			.	.	.																					.	.	.	.	.													.	.	.	.	.	.	.	.	.	.
Template Sequence		R	V	D	M	Q	L	V	K	I	L	S	E	N	S	R	L	T	Y	R	E	L	A	D	I	L	.	.	.	N	T	.	.	.	T	R	Q	R	I	A	R	R	I	D	K	L	K	K	L	G	I	I	R	K	.	.	.	.	.	F	T	I	I	P	D	I	D	K	L	G	Y	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure															T	T										T	.	.	.	T	S	.	.	.																T	S	S			.	.	.	.	.							T	G	G	G	T		.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																											.	.	.			.	.	.																					.	.	.	.	.													.	.	.	.	.	.	.	.	.	.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.				.	.				.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.						.	.	.	.	60	.	.	.	.	.	.	.
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	D	Y	N	D	A	V	V	V	I	H	T	S	P	G	A	A	Q	L	I	A	R	L	L	D	S	L	G	K	A	E	G	I	L	G	T	I	A	G	D	D	T	I	F	T	T	P	A	N	G	F	T	V	K	D	L	Y	E	A	I	L	E	L	F
Query Conservation
Alig confidence		.	.																														.
Template Conservation		.	.																														.
Template Sequence		.	.	M	Y	A	I	V	L	I	K	S	K	V	P	S	D	A	D	K	V	I	S	E	I	S	D	I	E	Y	V	K	.	S	V	E	K	G	V	G	R	Y	N	I	I	V	R	L	L	L	P	K	D	I	K	D	A	E	N	L	I	S	E	F	L
Template Known Secondary structure		.	.										S	S												T	T		T	T			.						S	S	S		S									S	S
Template Predicted Secondary structure		.	.																														.
Template SS confidence
				68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.		.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions