Job Description P0A6D0 Confidence 29.82% Date Thu Jan 5 11:02:51 GMT 2012 Rank 113 Aligned Residues 118 % Identity 15% Template c1i1gA_ PDB info PDB header:transcription Chain: A: PDB Molecule:transcriptional regulator lrpa; PDBTitle: crystal structure of the lrp-like transcriptional regulator from the2 archaeon pyrococcus furiosus Resolution 2.90 Å

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	A	F	K	A	L	L	K	E	E	K	F	S	S	Q	G	E	I	V	A	A	L	Q	E	Q	G	F	D	N	I	N	Q	S	K	V	S	R	M	L	T	K	F	G	A	V	R	T	R	N	A	K	M	E	M	V	Y	C	L	P	A	E	L	G	V	P	T	T	S	S	P	L	K	N	L	V	L	D	I	D	Y
Query Conservation
Alig confidence																								.	.	.			.	.	.																					.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																								.	.	.			.	.	.																					.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	I	I	L	E	I	L	E	K	D	A	R	T	P	F	T	E	I	A	K	K	L	.	.	.	G	I	.	.	.	S	E	T	A	V	R	K	R	V	K	A	L	E	E	K	G	I	I	E	G	.	.	.	.	.	Y	T	I	K	I	N	P	K	K	L	G	.	.	.	.	.	.	.	.	.	.	.	.	Y	S
Template Known Secondary structure												T	T											.	.	.	T	S	.	.	.																T	S	S			.	.	.	.	.							S	G	G	G	T	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																								.	.	.			.	.	.																					.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.				.	30				.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50						.	.	.	.	.	.	.	.	.	60	.													.	.
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	D	A	V	V	V	I	H	T	S	P	G	A	A	Q	L	I	A	R	L	L	D	S	L	G	K	A	E	G	I	L	G	T	I	A	G	D	D	T	I	F	T	T	P	A	N	G	F	T	V	K	D	L	Y	E	A	I	L	E	L	F	D	Q
Query Conservation
Alig confidence																																															.	.
Template Conservation																																															.	.
Template Sequence		L	V	T	I	T	G	V	D	T	K	P	E	K	L	F	E	V	A	E	K	L	K	E	Y	D	F	V	K	E	L	Y	L	S	S	G	D	H	M	I	M	A	V	I	W	A	.	.	K	D	G	E	D	L	A	E	I	I	S	N	K	I	G	K
Template Known Secondary structure												G	G	G											S	T	T								S	S	S	S	S								.	.	S	S											T	T	T	T
Template Predicted Secondary structure																																															.	.
Template SS confidence
		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.			.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions