Job Description P39408 Confidence 98.95% Date Thu Jan 5 12:00:44 GMT 2012 Rank 76 Aligned Residues 243 % Identity 12% Template d2q09a2 SCOP info TIM beta/alpha-barrel Metallo-dependent hydrolases Imidazolonepropionase-like Resolution 1.97

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		5	.	.	.	.	10	.	.																																								.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.
Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.
Query SS confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.
Query Sequence		F	I	D	T	H	C	H	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	F	P	P	F	S	G	D	E	E	A	S	L	Q	R	A	A	Q	A	G	V	G	K	I	I	V	P	A	T	E	.	.	.
Query Conservation										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.
Template Conservation
Template Sequence		L	I	D	C	H	T	H	L	I	F	A	G	S	R	A	E	E	F	E	L	R	Q	K	G	V	P	Y	A	E	I	A	R	K	G	G	G	I	I	S	T	V	R	A	T	R	A	A	S	E	D	Q	L	F	E	L	A	L	P	R	V	K	S	L	I	R	E	G	V	T	T	V	E	I	K	S	G	Y	G	L	T
Template Known Secondary structure													S											T	T									T	T		T											S																				T										S			S
Template Predicted Secondary structure
Template SS confidence
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
						43	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.
Query SS confidence		.	.	.	.
Query Sequence		.	.	.	.	A	E	N	F	A	R	V	L	A	L	A	E	N	Y	Q	P	L	Y	A	A	L	G	L	H	P	G	M	L	E	K	H	S	D	V	S	L	E	Q	L	Q	Q	A	L	E	R	R	P	A	K	V	V	A	V	G	E	I	G	L	D	L	F	G	D	D	P	Q	F	E	R	Q	Q	W	L	L	D	E
Query Conservation		.	.	.	.
Alig confidence		.	.	.	.
Template Conservation
Template Sequence		L	E	D	E	L	K	X	L	R	V	A	R	R	L	G	E	A	L	P	I	R	V	K	T	T	L	L	A	A	H	A	V	P	P	E	Y	R	D	D	P	D	S	W	V	E	T	I	C	Q	E	I	I	P	A	A	A	E	A	G	L	A	D	A	V	D	V	F	C	E	H	I	G	F	S	L	A	Q	T	E	Q
Template Known Secondary structure																			S	S	S										T	S			G	G	G	T	T												T								T	T			S					B	B	S	T	T	S	B
Template Predicted Secondary structure
Template SS confidence
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.					.	.	.	.	.	190	.	.	.	.
Predicted Secondary structure																																																																				.	.	.	.
Query SS confidence																																																																				.	.	.	.
Query Sequence		Q	L	K	L	A	K	R	Y	D	L	P	V	I	L	H	S	R	R	T	H	D	K	L	A	M	H	L	K	R	H	D	L	P	R	T	G	V	V	H	G	F	S	G	S	L	Q	Q	A	E	R	F	V	Q	L	G	Y	K	I	G	V	G	G	T	I	T	Y	.	.	.	.	P	R	A	S	K	T	R	D	V	I
Query Conservation																																																																				.	.	.	.
Alig confidence																																					.																															.	.	.	.
Template Conservation																																					.
Template Sequence		V	Y	L	A	A	D	Q	Y	G	L	A	V	K	G	H	X	D	Q	L	S	N	L	G	G	S	T	L	A	A	N	F	G	A	L	S	.	V	D	H	L	E	Y	L	D	P	E	G	I	Q	A	L	A	H	R	G	V	V	A	T	L	L	P	T	A	F	Y	F	L	K	E	T	K	L	P	P	V	V	A	L	R
Template Known Secondary structure									T	T								S	S	S				S								T	T		S		.					T	T													T													T	T
Template Predicted Secondary structure																																					.
Template SS confidence
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.		.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	K	L	P	L	A	S	L	L	L	E	T	D	A	P	D	M	P	L	N	G	F	Q	G	Q	P	N	R	P	E	Q	A	A	R	V	F	A	V	L	C	E	L	R	R	E	P	A	D	E	I	A	Q	A	L	L	N	N	T	Y	T	L	F	N	V
Query Conservation
Alig confidence						.	.													.	.	.	.	.	.	.	.
Template Conservation						.	.													.	.	.	.	.	.	.	.
Template Sequence		K	A	G	V	.	.	P	X	A	V	S	S	D	I	N	P	G	T	.	.	.	.	.	.	.	.	A	P	I	V	S	L	R	X	A	X	N	X	A	C	T	L	F	G	L	T	P	V	E	A	X	A	G	V	T	R	H	A	A	R	A	L	G	E
Template Known Secondary structure			T	T		.	.									B	T	T	T	.	.	.	.	.	.	.	.	B																											T	T							T	T
Template Predicted Secondary structure						.	.													.	.	.	.	.	.	.	.
Template SS confidence
		307	.	.	310			.	.	.	.	.	.	.	.	.	320	.	.									.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions