Job Description P39408 Confidence 100.00% Date Thu Jan 5 12:00:44 GMT 2012 Rank 16 Aligned Residues 236 % Identity 13% Template d2ffia1 SCOP info TIM beta/alpha-barrel Metallo-dependent hydrolases PP1699/LP2961-like Resolution 2.61

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.													.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.			.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.																												.	.
Query SS confidence																			.	.	.	.	.	.	.	.	.	.	.	.																												.	.
Query Sequence		M	I	C	R	F	I	D	T	H	C	H	F	D	F	P	P	F	.	.	.	.	.	.	.	.	.	.	.	.	S	G	D	E	E	A	S	L	Q	R	A	A	Q	A	G	V	G	K	I	I	V	P	A	T	E	A	E	.	.	N	F	A	R	V	L	A	L	A	E	N	Y	Q	P	L	Y	A	A	L	G	L	H
Query Conservation																			.	.	.	.	.	.	.	.	.	.	.	.																												.	.
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.																												.	.
Template Conservation
Template Sequence		L	H	L	T	A	I	D	S	H	A	H	V	F	S	R	G	L	N	L	A	S	Q	R	R	Y	A	P	N	Y	D	A	P	L	G	D	Y	L	G	Q	L	R	A	H	G	F	S	H	G	V	L	V	Q	P	S	F	L	G	T	D	N	R	Y	L	L	S	A	L	Q	T	V	P	G	Q	L	R	G	V	V	X	L
Template Known Secondary structure									B					B								T	T			S	S			S		B												T	S							B			G	G	G	T	T												S	T	T	T	B			B	B
Template Predicted Secondary structure
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.		.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure																																												.
Query SS confidence																																												.
Query Sequence		P	G	M	L	E	K	H	S	D	V	S	L	E	Q	L	Q	Q	A	L	E	R	R	P	A	K	V	V	A	V	G	E	I	G	L	D	L	F	G	D	D	P	Q	.	F	E	R	Q	Q	W	L	L	D	E	Q	L	K	L	A	K	R	Y	D	L	P	V	I	L	H	S	R	R	T	H	D	K	L	A	M	H	L
Query Conservation																																												.
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.
Template Conservation							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	R	D	V	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	A	T	L	A	E	X	A	R	L	G	V	R	G	V	R	L	N	L	X	G	Q	D	X	P	D	L	T	G	A	Q	W	R	P	L	L	E	R	I	G	E	Q	G	W	H	V	E	L	H	R	Q	V	A	D	I	P	V	L	V	R	A
Template Known Secondary structure			S	S			.	.	.	.	.	.	.	.	.	.	.	.	.	.									T	T	T									S	S	S					T	T	S	T	T	T											T							S		T	T	T
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		90	.	.	.	.															.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		146	.	.	.	150	.	.	.	.	.	.	.	.	.										160	.	.	.	.	.	.	.	.	.	170	.	.		.	.	.	.	.	.	.	180	.	.	.	.	.	.										.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.	.														.															.	.	.	.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.	.	.	.														.															.	.	.	.	.	.	.	.	.
Query Sequence		K	R	H	D	L	P	R	T	G	V	V	H	G	F	.	.	.	.	.	.	.	.	.	S	G	S	L	Q	Q	A	E	R	F	V	Q	L	.	G	Y	K	I	G	V	G	G	T	I	T	Y	P	R	.	.	.	.	.	.	.	.	.	A	S	K	T	R	D	V	I	A	K	L	P	L	A	S	L	L	L	E	T
Query Conservation																.	.	.	.	.	.	.	.	.														.															.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.														.															.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	Q	P	Y	G	L	D	I	V	I	D	H	F	G	R	P	D	A	R	R	G	L	G	Q	P	G	F	A	E	L	L	T	L	S	G	R	G	K	V	W	V	K	V	S	G	I	Y	R	L	Q	G	S	P	E	E	N	L	A	F	A	R	Q	A	L	C	A	L	E	A	H	Y	G	A	E	R	L	X	W	G	S
Template Known Secondary structure			T	T	T	T						S	G	G	G	S			T	T	S		T	T		T	T					T	T					S									G	G	G	S	S	S																				T		G	G	G
Template Predicted Secondary structure
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	A	P	D	M	P	L	N	G	F	Q	G	Q	P	N	R	P	E	Q	A	A	R	V	F	A	V	L	C	E	L	R	R	E	P	A	D	E	I	A	Q	A	L	L	N	N	T	Y	T	L	F	N	V
Query Conservation
Alig confidence									.	.	.	.	.	.	.																	.
Template Conservation									.	.	.	.	.	.	.																	.
Template Sequence		D	W	P	H	T	Q	H	.	.	.	.	.	.	.	E	S	E	V	S	F	G	S	A	V	E	Q	F	E	A	L	.	G	C	S	A	Q	L	R	Q	A	L	L	L	D	T	A	R	A	L	F	G	F
Template Known Secondary structure			T	T		T	T		.	.	.	.	.	.	.	T	T	T														.												T							T	T
Template Predicted Secondary structure									.	.	.	.	.	.	.																	.
Template SS confidence
		236	.	.	.	240	.	.								.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.		.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions