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Job DescriptionP39408
Confidence99.63%DateThu Jan 5 12:00:44 GMT 2012
Rank42Aligned Residues247
% Identity16%Templated1ynya2
SCOP infoTIM beta/alpha-barrel Metallo-dependent hydrolases Hydantoinase (dihydropyrimidinase), catalytic domain
Resolution2.30

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10... ......20.........30.........40.........50.........60.........70.........80
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Query Sequence  FIDTHCHFD. . . . FPPFSGDEEASLQRAAQAGVGKIIVPATEAENFARVLALAENYQPLYAALGLHPGMLEKHSDVSLEQ
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Template Sequence  GIDPHTHLDMPFGGTVTADDFFTGTRAAAFGGTTSIVDFCLTKKGESLKSAIATWHEKARGKAVIDYGFHLMIAEANDQV
Template Known Secondary structure 
TT
TT
S

TT


SS

TTT
SS
S


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   54.....60.........70.........80.........90.........100.........110.........120.........130...
 
   81........90.........100.........110... ......120.........130......
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Query Sequence  LQQALERRPAKVVAVGEIGLDLFGDDPQFERQQ. WLLDEQLKLAKRYDLPVILHSRR. . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  LEELESV. . . . ISSEGITSLKVFMAYKNVFQADDETLFKTLVKAKELGALVQVHAENGDVLDYLTKKALAEGNTDPIYHA
Template Known Secondary structure  ....TS


S
STTTT


T

S
TT

STT
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   134.....140 .........150.........160.........170.........180.........190.........200.........
 
   137..140.........150.........160. ........170.........180..
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Query Sequence  . . . . . . . . . . THDKLAMHLKRHDLPRTGVVHGFSG. SLQQAERFVQLGYKIGVGGTI. . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  YTRPPEAEGEATGRAIALTALAG. SQLYVVHVSCASAVQRIAEAREKGWNVYGETCPQYLALDVSIMDQPDFEGAKYVWS
Template Known Secondary structure  TS
T.


S

STT




GGGG

SSSGGGGG

S
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   210.........220.........230.. .......240.........250.........260.........270.........280........
 
   183......190.........200.........210...... ...220.........230.........240......
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Query Sequence  . . . . TYPRASKTRDVIAKLPLASLLLETDAPDMPLNGF. . . . . . . . . . . . QGQPNRPEQAARVFAVLCELRREPADEIAQ
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Template Sequence  PPLREKWNQEVLWSALKNGILQ. . TVGSDHCPFNFRGQKELGRGDFTKIPNGGPLIEDRLTILYSEGVRQGRISLNQFVD
Template Known Secondary structure  S



TTTTSS
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B



TTTTGGGGTT
GGGS


B

TTTTTTTTSS
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   289290.........300.........310 .........320.........330.........340.........350.........360......
 
   247..250........
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Query Sequence  ALLNNTYTLFNV
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Template Sequence  ISSTKAAKLFGM
Template Known Secondary structure  TTT
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   367..370........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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