Job Description P39408 Confidence 99.03% Date Thu Jan 5 12:00:44 GMT 2012 Rank 73 Aligned Residues 248 % Identity 13% Template d1un7a2 SCOP info TIM beta/alpha-barrel Metallo-dependent hydrolases N-acetylglucosamine-6-phosphate deacetylase, NagA, catalytic domain Resolution 2.05

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		5	.	.	.	.	10	.						.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.			.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.												.	.	60	.	.	.	.	.	.
Predicted Secondary structure									.	.	.	.	.																												.	.																				.	.	.	.	.	.	.	.	.	.	.
Query SS confidence									.	.	.	.	.																												.	.																				.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	I	D	T	H	C	H	.	.	.	.	.	F	D	F	P	P	F	S	G	D	E	E	A	S	L	Q	R	A	A	Q	A	G	V	G	K	I	I	V	.	.	P	A	T	E	A	E	N	F	A	R	V	L	A	L	A	E	N	Y	Q	.	.	.	.	.	.	.	.	.	.	.	P	L	Y	A	A	L	G	L	H
Query Conservation									.	.	.	.	.																												.	.																				.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.																												.	.																				.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		M	I	D	I	H	I	H	G	G	Y	G	A	D	T	M	D	A	S	F	S	T	L	D	I	M	S	S	R	L	P	E	E	G	T	T	S	F	L	A	T	T	I	T	Q	E	H	G	N	I	S	Q	A	L	V	N	A	R	E	W	K	A	A	E	E	S	S	L	L	G	A	E	L	L	G	I	H	L	E	G	P
Template Known Secondary structure											T	T			G	G	G		S											G	G	G	G	T										S																					S	G	G	G	S	S	S										S
Template Predicted Secondary structure
Template SS confidence
		59	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.		.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure																																																																				.
Query SS confidence																																																																				.
Query Sequence		P	G	M	L	E	K	H	S	D	V	S	L	E	Q	L	Q	Q	A	L	E	R	R	P	A	K	V	V	A	V	G	E	I	G	L	D	L	F	G	D	D	P	Q	F	E	R	Q	Q	W	L	L	D	E	Q	L	K	L	A	K	R	Y	D	L	P	V	I	L	.	H	S	R	R	T	H	D	K	L	A	M	H	L
Query Conservation																																																																				.
Alig confidence																																									.	.	.	.																								.
Template Conservation																																									.	.	.	.
Template Sequence		F	V	S	P	K	R	A	G	A	Q	P	K	E	W	I	R	P	S	D	V	E	L	F	K	K	W	Q	Q	E	A	G	G	L	I	K	I	V	T	L	.	.	.	.	A	P	E	E	D	Q	H	F	E	L	I	R	H	L	K	D	E	S	I	I	A	S	M	G	H	T	D	A	D	S	A	L	L	S	D	A	A
Template Known Secondary structure		S	S		G	G	G		T	T	S		G	G	G																T	T	T								.	.	.	.		G	G	G	S	G	G	G									T	T							S	B
Template Predicted Secondary structure																																									.	.	.	.
Template SS confidence
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.					.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.									.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.																																																					.	.
Query SS confidence																				.	.	.	.	.	.	.	.																																																					.	.
Query Sequence		K	R	H	D	L	P	R	T	G	V	V	H	G	F	S	G	S	L	.	.	.	.	.	.	.	.	Q	Q	A	E	R	F	V	Q	L	G	Y	K	I	G	V	G	G	T	I	T	Y	P	R	A	S	K	T	R	D	V	I	A	K	L	P	L	A	S	L	L	L	E	T	D	A	P	D	M	P	L	N	G	.	.
Query Conservation																				.	.	.	.	.	.	.	.																																																					.	.
Alig confidence				.	.					.										.	.	.	.	.	.	.	.																																																					.	.
Template Conservation				.	.					.
Template Sequence		K	A	.	.	G	A	S	H	.	M	T	H	L	Y	N	A	M	S	P	F	H	H	R	E	P	G	V	I	G	T	A	L	A	H	D	G	F	V	T	E	L	I	A	D	G	I	H	S	H	P	L	A	A	K	L	A	F	L	A	K	G	S	S	K	L	I	L	I	T	D	S	M	R	A	K	G	L	K	D	G
Template Known Secondary structure			T	.	.	T				.		S	S	T	T	S	S	B					S	S	S											T	T								S	S	S	S	S														T	T	S							B		T	T	T	T	S		S
Template Predicted Secondary structure				.	.					.
Template SS confidence
		215	.			.	.	.	220		.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
																					216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	Q	G	Q	P	N	R	P	E	Q	A	A	R	V	F	A	V	L	C	E	L	R	R	E	P	A	D	E	I	A	Q	A	L	L	N	N	T	Y	T	L	F	N	V	P
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	Y	E	F	G	G	Q	S	V	T	V	R	G	R	T	A	L	L	S	D	G	T	L	A	G	S	I	L	K	M	N	E	G	A	R	H	M	R	E	F	T	N	C	S	W	T	D	I	A	N	I	T	S	E	N	A	A	K	Q	L	G	I	F
Template Known Secondary structure						T	T							T	T					T	T	S		B		S	B																											T								T		T
Template Predicted Secondary structure
Template SS confidence
		292	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions