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Job DescriptionP39408
Confidence99.03%DateThu Jan 5 12:00:44 GMT 2012
Rank73Aligned Residues248
% Identity13%Templated1un7a2
SCOP infoTIM beta/alpha-barrel Metallo-dependent hydrolases N-acetylglucosamine-6-phosphate deacetylase, NagA, catalytic domain
Resolution2.05

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10. ........20.........30........ .40.........50....... ..60......
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Query Sequence  FIDTHCH. . . . . FDFPPFSGDEEASLQRAAQAGVGKIIV. . PATEAENFARVLALAENYQ. . . . . . . . . . . PLYAALGLH
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Template Sequence  MIDIHIHGGYGADTMDASFSTLDIMSSRLPEEGTTSFLATTITQEHGNISQALVNAREWKAAEESSLLGAELLGIHLEGP
Template Known Secondary structure 
TTGGG
SGGGGT

S


SGGGSSS
S
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   5960.........70.........80.........90.........100.........110.........120.........130........
 
   67..70.........80.........90.........100.........110.........120.........130.. .......140.....
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Query Sequence  PGMLEKHSDVSLEQLQQALERRPAKVVAVGEIGLDLFGDDPQFERQQWLLDEQLKLAKRYDLPVIL. HSRRTHDKLAMHL
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Template Sequence  FVSPKRAGAQPKEWIRPSDVELFKKWQQEAGGLIKIVTL. . . . APEEDQHFELIRHLKDESIIASMGHTDADSALLSDAA
Template Known Secondary structure  SS
GGG
TTS
GGG




TTT
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GGGSGGGTT

SB


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   139140.........150.........160.........170....... ..180.........190.........200.........210....
 
   146...150.........160... ......170.........180.........190.........200.........210.....
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Query Sequence  KRHDLPRTGVVHGFSGSL. . . . . . . . QQAERFVQLGYKIGVGGTITYPRASKTRDVIAKLPLASLLLETDAPDMPLNG. .
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Template Sequence  KA. . GASH. MTHLYNAMSPFHHREPGVIGTALAHDGFVTELIADGIHSHPLAAKLAFLAKGSSKLILITDSMRAKGLKDG
Template Known Secondary structure  T..T

.SSTTSSB



SSS

TT

SSSSS

TTS

B
TTTTS
S
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   215. ...220 .........230.........240.........250.........260.........270.........280.........290.
 
   216...220.........230.........240.........250.........
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Query Sequence  . . . . . . . . . . . . . . . . . . . FQGQPNRPEQAARVFAVLCELRREPADEIAQALLNNTYTLFNVP
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Template Sequence  VYEFGGQSVTVRGRTALLSDGTLAGSILKMNEGARHMREFTNCSWTDIANITSENAAKQLGIF
Template Known Secondary structure  TTTT
TTS
B
SB





TT
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   292.......300.........310.........320.........330.........340.........350....
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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