Job Description P39408 Confidence 99.51% Date Thu Jan 5 12:00:44 GMT 2012 Rank 45 Aligned Residues 245 % Identity 13% Template d1kcxa2 SCOP info TIM beta/alpha-barrel Metallo-dependent hydrolases Hydantoinase (dihydropyrimidinase), catalytic domain Resolution 2.12

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		5	.	.	.	.	10	.	.	.					.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.				.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure											.	.	.	.																																.	.	.
Query SS confidence											.	.	.	.																																.	.	.
Query Sequence		F	I	D	T	H	C	H	F	D	.	.	.	.	F	P	P	F	S	G	D	E	E	A	S	L	Q	R	A	A	Q	A	G	V	G	K	I	I	V	P	A	T	E	A	E	.	.	.	N	F	A	R	V	L	A	L	A	E	N	Y	Q	P	L	Y	A	A	L	G	L	H	P	G	M	L	E	K	H	S	D	V	S
Query Conservation											.	.	.	.																																.	.	.
Alig confidence											.	.	.	.																																.	.	.
Template Conservation
Template Sequence		G	I	D	V	N	T	Y	L	Q	K	P	S	Q	G	M	T	S	A	D	D	F	F	Q	G	T	K	A	A	L	A	G	G	T	T	M	I	I	D	H	V	V	P	E	P	G	S	S	L	L	T	S	F	E	K	W	H	E	A	A	D	T	K	S	C	C	D	Y	S	L	H	V	D	I	T	S	W	Y	D	G	V
Template Known Secondary structure									T	T				T	T				S	S												T	T												T	T																			S	S													T	T
Template Predicted Secondary structure
Template SS confidence
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.		.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
Predicted Secondary structure																																				.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																				.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	E	Q	L	Q	Q	A	L	E	R	R	P	A	K	V	V	A	V	G	E	I	G	L	D	L	F	G	D	D	P	Q	F	E	R	.	Q	Q	W	L	L	D	E	Q	L	K	L	A	K	R	Y	D	L	P	V	I	L	H	S	R	R	T	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																				.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.																	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.	.	.	.	.	.	.
Template Sequence		R	E	E	L	E	V	L	V	Q	D	K	.	.	.	.	.	.	.	G	V	N	S	F	Q	V	Y	M	A	Y	K	D	L	Y	Q	M	S	D	S	Q	L	Y	E	A	F	T	F	L	K	G	L	G	A	V	I	L	V	H	A	E	N	G	D	L	I	A	Q	E	Q	K	R	I	L	E	M	G	I	T	G	P	E
Template Known Secondary structure											T	T	.	.	.	.	.	.	.									S		S	T	T	T	T																	T	T																							T	T			S	T
Template Predicted Secondary structure													.	.	.	.	.	.	.
Template SS confidence
		149	150	.	.	.	.	.	.	.	.	.								160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
																	139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	K	L	A	M	H	L	K	R	H	D	L	P	R	T	G	V	V	H	G	F	S	G	S	L	Q	Q	A	E	R	F	V	Q	L	G	Y	K	I	G	V	G	G	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	H	A	L	S	R	P	E	E	L	E	A	E	A	V	F	R	A	I	A	I	A	G	R	I	N	C	P	V	Y	I	T	K	V	M	S	K	S	A	A	D	I	I	A	L	A	R	K	K	G	P	L	V	F	G	E	P	I	A	A	S	L	G	T	D	G	T	H	Y	W	S	K	N	W	A	K	A	A	A	F
Template Known Secondary structure							S		T																		T																								S								B								G	G	G	G	G		S	S							T
Template Predicted Secondary structure
Template SS confidence
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
									182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.												.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	I	T	Y	P	R	A	S	K	T	R	D	V	I	A	K	L	P	L	A	S	L	L	L	E	T	D	A	P	D	M	P	L	N	.	.	.	.	.	.	.	.	.	.	.	G	F	Q	G	Q	P	N	R	P	E	Q	A	A	R	V	F	A	V	L	C	E	L	R	R	E	P	A	D	E
Query Conservation		.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.																			.	.														.	.	.	.	.	.	.	.	.	.	.
Template Conservation																											.	.
Template Sequence		V	T	S	P	P	L	S	P	D	P	T	T	P	D	Y	L	T	S	L	L	A	C	G	D	L	.	.	Q	V	T	G	S	G	H	C	P	Y	S	T	A	Q	K	A	V	G	K	D	N	F	T	L	I	P	E	G	V	N	G	I	E	E	R	M	T	V	V	W	D	K	A	V	A	T	G	K	M	D	E	N	Q
Template Known Secondary structure				S	S				S		T	T												T	S	S	.	.				B			B									G	G	G	S	S		G	G	G	S				B			T	T	T										T	T	T	T	S	S
Template Predicted Secondary structure																											.	.
Template SS confidence
		302	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.			.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	Q	A	L	L	N	N	T	Y	T	L	F	N	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	V	A	V	T	S	T	N	A	A	K	I	F	N	L
Template Known Secondary structure							T								T
Template Predicted Secondary structure
Template SS confidence
		380	.	.	.	.	.	.	.	.	.	390	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions