Job Description P39408 Confidence 99.67% Date Thu Jan 5 12:00:44 GMT 2012 Rank 39 Aligned Residues 247 % Identity 15% Template d1gkra2 SCOP info TIM beta/alpha-barrel Metallo-dependent hydrolases Hydantoinase (dihydropyrimidinase), catalytic domain Resolution 2.60

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.				.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																.	.	.
Query SS confidence																.	.	.
Query Sequence		F	I	D	T	H	C	H	F	D	F	P	P	F	S	.	.	.	G	D	E	E	A	S	L	Q	R	A	A	Q	A	G	V	G	K	I	I	V	P	A	T	E	A	E	N	F	A	R	V	L	A	L	A	E	N	Y	Q	P	L	Y	A	A	L	G	L	H	P	G	M	L	E	K	H	S	D	V	S	L	E	Q	L
Query Conservation																.	.	.
Alig confidence																.	.	.
Template Conservation
Template Sequence		V	V	D	E	H	V	H	I	I	D	M	D	L	K	N	R	Y	G	R	F	E	L	D	S	E	S	A	A	V	G	G	I	T	T	I	I	E	M	P	I	T	F	P	P	T	T	T	L	D	A	F	L	E	K	K	K	Q	A	G	Q	R	L	K	V	D	F	A	L	Y	G	G	G	V	P	G	N	L	P	E	I
Template Known Secondary structure												G	G	G	T	T	T	S														T								S		S	S	S		S		S																S	S					B					T	T
Template Predicted Secondary structure
Template SS confidence
		56	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110				.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure																															.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																															.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	Q	A	L	E	R	R	P	A	K	V	V	A	V	G	E	I	G	L	D	L	F	G	D	D	P	Q	F	E	.	.	.	R	Q	Q	W	L	L	D	E	Q	L	K	L	A	K	R	Y	D	L	P	V	I	L	H	S	R	R	T	H	D	K	L	A	M	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																															.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.																.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation								.	.	.	.	.	.	.	.
Template Sequence		R	K	M	H	D	A	.	.	.	.	.	.	.	.	G	A	V	G	F	S	M	M	A	A	S	V	P	G	M	F	D	A	V	S	D	G	E	L	F	E	I	F	Q	E	I	A	A	C	G	S	V	I	V	V	H	A	E	N	E	T	I	I	Q	A	L	Q	K	Q	I	K	A	A	G	G	K	D	M	A	A	Y
Template Known Secondary structure							T	.	.	.	.	.	.	.	.	T			B			B	S	S		S	B	T	T	T	B		B																	T						B																	T	T			S
Template Predicted Secondary structure								.	.	.	.	.	.	.	.
Template SS confidence
		136	.	.	.	140	.									.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
																				145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.		.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.																						180	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	K	R	H	D	L	P	R	T	G	V	V	H	G	F	S	G	.	S	L	Q	Q	A	E	R	F	V	Q	L	G	Y	K	I	G	V	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	T	I	T	Y
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	A	S	Q	P	V	F	Q	E	N	E	A	I	Q	R	A	L	L	L	Q	K	E	A	G	C	R	L	I	V	L	H	V	S	N	P	D	G	V	E	L	I	H	Q	A	Q	S	E	G	Q	D	V	H	C	E	S	G	P	Q	Y	L	N	I	T	T	D	D	A	E	R	I	G	P	Y	M	K	V	A	P	P	V
Template Known Secondary structure					S																														S													T	T													S			G	G	G					G	G	G	G			S	S
Template Predicted Secondary structure
Template SS confidence
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.		.	.	.	.	.	.	.	210	.	.	.	.	.	.												.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
Predicted Secondary structure																				.															.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																				.															.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	R	A	S	K	T	R	D	V	I	A	K	L	P	L	A	S	L	.	L	L	E	T	D	A	P	D	M	P	L	N	G	F	.	.	.	.	.	.	.	.	.	.	.	Q	G	Q	P	N	R	P	E	Q	A	A	R	V	F	A	V	L	C	E	L	R	R	E	P	A	D	E	I	A	Q	A	L	L	N	N	T
Query Conservation																				.															.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.															.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	S	A	E	M	N	I	R	L	W	E	Q	L	E	N	G	L	I	D	T	L	G	S	D	H	G	G	H	P	V	E	D	K	E	P	G	W	K	D	V	W	K	A	G	N	G	A	L	G	L	E	T	S	L	P	M	M	L	T	N	G	V	N	K	G	R	L	S	L	E	R	L	V	E	V	M	C	E	K	P
Template Known Secondary structure																	T														G	G	G	T	G	G	G	G	T		G	G	G	S				B			T	T	T									T	G	G	G	T	S	S										T
Template Predicted Secondary structure
Template SS confidence
		289	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.
		253	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	T	L	F	N	V	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	K	L	F	G	I	Y
Template Known Secondary structure						T		T
Template Predicted Secondary structure
Template SS confidence
		369	370	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions