Job Description P39408 Confidence 98.27% Date Thu Jan 5 12:00:44 GMT 2012 Rank 120 Aligned Residues 166 % Identity 22% Template d1e9yb2 SCOP info TIM beta/alpha-barrel Metallo-dependent hydrolases alpha-subunit of urease, catalytic domain Resolution 3.00

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.														.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																							.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	D	T	H	C	H	F	D	F	P	P	F	S	G	D	E	E	A	S	L	Q	R	A	A	Q	A	G	V	G	K	I	I	V	P	A	T	E	.	.	.	.	.	.	.	.	.	.	.	.	.	A	E	N	F	A	R	V	L	A	L	A	E	N	Y	Q	P	L	Y	A	A	L	G	L	H	P	G	M	L	E	K
Query Conservation																																							.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.
Template Conservation													.	.	.	.	.	.	.																																																.	.	.	.	.	.	.
Template Sequence		I	D	T	H	I	H	F	I	S	P	Q	.	.	.	.	.	.	.	Q	I	P	T	A	F	A	S	G	V	T	T	M	I	G	G	G	T	G	P	A	D	G	T	N	A	T	T	I	T	P	G	R	R	N	L	K	W	M	L	R	A	A	E	E	Y	S	.	.	.	.	.	.	.	M	N	L	G	F	L	A	K
Template Known Secondary structure								T	T		T	T	.	.	.	.	.	.	.								T	T										S	S																								T	T	S	S	.	.	.	.	.	.	.	S					B
Template Predicted Secondary structure													.	.	.	.	.	.	.																																																.	.	.	.	.	.	.
Template SS confidence
		133	.	.	.	.	.	.	140	.	.	.								.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190								.	.	.	.	.	.	.	.
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.			.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure																																																																.	.
Query SS confidence																																																																.	.
Query Sequence		H	S	D	V	S	L	E	Q	L	Q	Q	A	L	E	R	R	P	A	K	V	V	A	V	G	E	I	G	L	D	L	F	G	D	D	P	Q	F	E	R	Q	Q	W	L	L	D	E	Q	L	K	L	A	K	R	Y	D	L	P	V	I	L	H	S	.	.	R	R	T	H	D	K	L	A	M	H	L	K	R	H	D	L
Query Conservation																																																																.	.
Alig confidence																	.	.	.	.	.	.	.	.						.										.	.	.																						.	.
Template Conservation																	.	.	.	.	.	.	.	.						.										.	.	.
Template Sequence		G	N	A	S	N	D	A	S	L	A	D	Q	I	E	A	.	.	.	.	.	.	.	.	G	A	I	G	F	.	I	H	E	D	W	G	T	T	P	.	.	.	S	A	I	N	H	A	L	D	V	A	D	K	Y	D	V	Q	V	A	I	H	T	D	T	L	N	E	A	G	C	V	E	D	T	M	A	A	I	A	G
Template Known Secondary structure					S											T	.	.	.	.	.	.	.	.	T		S	B		.			G	G	G					.	.	.													T	T		B							T	T		S	S											T	T
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.						.										.	.	.
Template SS confidence
		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.									.	.	.	.	.		.	220	.	.	.	.	.	.	.				.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
		151	.	.	.	.	.	.				.	.	160	.	.		.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
Predicted Secondary structure									.	.	.						.
Query SS confidence									.	.	.						.
Query Sequence		P	R	T	G	V	V	H	.	.	.	G	F	S	G	S	.	L	Q	Q	A	E	R	F	V	Q	L	G	Y	K	I	G	V	G	G	T	I	T	Y	P	R	A	S	K	T	R	D	V	I	A	K	L
Query Conservation									.	.	.						.
Alig confidence									.	.	.						.
Template Conservation
Template Sequence		R	T	M	H	T	F	H	T	E	G	A	G	G	G	H	A	P	D	I	I	K	V	A	G	E	H	N	I	L	P	A	S	T	N	P	T	I	P	F	T	V	N	T	E	A	E	H	M	D	M	L
Template Known Secondary structure							T	T	T	T	S	T	T	S		S	T	T	T	G	G	G	G	G	G	S	T	T							G	G	G		S		B	T	T
Template Predicted Secondary structure
Template SS confidence
		268	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions