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Job DescriptionP39408
Confidence60.26%DateThu Jan 5 12:00:44 GMT 2012
Rank171Aligned Residues161
% Identity12%Templatec3qfeB_
PDB info PDB header:lyaseChain: B: PDB Molecule:putative dihydrodipicolinate synthase family protein; PDBTitle: crystal structures of a putative dihydrodipicolinate synthase family2 protein from coccidioides immitis
Resolution2.35 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   21........30.........40. ........50.........60.........70.........80.........90...
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Query Sequence  EEASLQRAAQAGVGKIIVPAT. . . . . . . EAENFARVLALAENYQPLYAALGLHPGMLEKHSDVSLEQLQQALERRPAKVV
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Template Sequence  QERYYAYLARSGLTGLVILGTNAEAFLLTREERAQLIATARKAVGPDFPIMAGVGAHST. . . . . . . . . . RQVLEHINDAS
Template Known Secondary structure  TTT
ST
GGGTGGGS

TTS



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   30.........40.........50.........60.........70.........80........ .90.........
 
   94.....100.........110.........120.........130... ......140.......
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Query Sequence  AVGEIGLDLFGDDPQFERQQWLLDEQLKLAKRYDLPVILH. . . . . . . . . . . . . . . . . . . . . . . . . . SRRTHDKLAMHLKR
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Template Sequence  VAGANYVLVLPPAY. . TTPPVIKSFFDDVSCQSPLPVVIYNFPIDLDSDMITTIARKNPNVVGVKLTCASVGKITRLAAT
Template Known Secondary structure  T
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   100.........110... ......120.........130.........140.........150.........160.........170.......
 
   148.150.........160.........170.........180.........190.......
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Query Sequence  HDLPRTGVVHGFSGSLQQAERFVQLGYKIGVGGTITYPRASKTRDVIAKL
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Template Sequence  LPPAAFSV. . . FGGQSDFLIGGLSVGSAGCIAAFANVF. PKTVSKIYELY
Template Known Secondary structure  S
TTT
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GGGTT


GGGGT
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   187..190.... .....200.........210.........220. ........230..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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