Job Description P39408 Confidence 99.92% Date Thu Jan 5 12:00:44 GMT 2012 Rank 29 Aligned Residues 254 % Identity 13% Template c3pnzD_ PDB info PDB header:hydrolase Chain: D: PDB Molecule:phosphotriesterase family protein; PDBTitle: crystal structure of the lactonase lmo2620 from listeria monocytogenes Resolution 1.60 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.															.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.			.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.
Query SS confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.
Query Sequence		F	I	D	T	H	C	H	F	D	F	P	P	F	S	G	D	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	A	S	L	Q	R	A	A	Q	A	G	V	G	K	I	I	V	P	A	T	E	A	E	.	.	N	F	A	R	V	L	A	L	A	E	N	Y	Q	P	L	Y	A	A	L	G	L	H	P	G
Query Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.
Template Conservation
Template Sequence		F	T	Y	S	H	E	H	I	V	C	V	P	A	Y	W	Q	E	R	D	A	D	D	L	L	L	D	D	K	E	K	S	Q	L	D	V	Q	D	F	A	D	L	G	G	K	T	I	V	D	A	T	A	V	D	Y	G	R	R	V	L	D	V	A	Q	I	S	K	E	T	G	I	Q	I	V	G	T	A	G	F	N	K
Template Known Secondary structure		S								S	B								T	T		G	G	G		B																T	T										G	G	G		B																					S
Template Predicted Secondary structure
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
		69	70	.	.																									.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	L	E	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	S	D	V	S	L	E	Q	L	Q	Q	A	L	E	R	R	P	A	K	V	V	A	V	G	E	I	G	L	D	L	F	G	D	D	P	Q	F	E	R	Q	Q	W	L	L	D	E	Q	L	K	L	A	K
Query Conservation						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	F	L	W	D	G	K	I	K	P	E	L	K	P	I	I	G	D	F	E	T	Y	Y	E	W	I	E	N	T	T	T	D	K	L	T	E	F	V	V	N	E	V	E	N	G	L	E	G	T	P	Y	K	A	G	Q	V	F	G	T	G	Y	N	M	I	T	P	L	E	E	K	T	I	R	A	V	A	R	A	H	H
Template Known Secondary structure		G	G	G	G	G	S	B			G	G	G						S		S	B							T	S															T		G	G	G	S	S								B		B	T	T	B
Template Predicted Secondary structure
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
		125	.	.	.	.	130	.	.	.	.			.	.	.	.	.	140	.	.	.	.	.	.	.	.			.	150	.	.	.	.	.	.	.	.		.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.							.	.	190	.	.	.
Predicted Secondary structure												.	.															.	.											.																														.	.	.	.	.	.
Query SS confidence												.	.															.	.											.																														.	.	.	.	.	.
Query Sequence		R	Y	D	L	P	V	I	L	H	S	.	.	R	R	T	H	D	K	L	A	M	H	L	K	R	H	.	.	D	L	P	R	T	G	V	V	H	G	.	F	S	G	S	L	Q	Q	A	E	R	F	V	Q	L	G	Y	K	I	G	V	G	G	T	I	T	Y	P	R	A	.	.	.	.	.	.	S	K	T	R	D	V
Query Conservation												.	.															.	.											.																														.	.	.	.	.	.
Alig confidence												.	.															.	.											.																														.	.	.	.	.	.
Template Conservation
Template Sequence		E	T	K	A	P	I	H	S	H	T	E	A	G	T	M	A	L	E	Q	I	E	I	L	K	Q	E	N	I	P	L	E	Y	L	S	I	G	H	M	D	R	N	L	D	P	Y	Y	H	K	Q	V	A	K	T	G	A	F	M	S	F	D	G	I	A	K	I	K	Y	A	P	E	S	A	R	I	A	A	I	L	Y	L
Template Known Secondary structure										B		G	G	G													T	T			G	G	G				T	T	G	G	G	S											T	T	T								T	T		T	T	T
Template Predicted Secondary structure
Template SS confidence
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.						.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
Predicted Secondary structure																																		.	.	.	.	.
Query SS confidence																																		.	.	.	.	.
Query Sequence		I	A	K	L	P	L	A	S	L	L	L	E	T	D	A	P	D	M	P	L	N	G	F	Q	G	Q	P	N	R	P	E	Q	.	.	.	.	.	A	A	R	V	F	A	V	L	C	E	L	R	R	E	P	A	D	E	I	A	Q	A	L	L	N	N	T	Y	T	L	F	N	V
Query Conservation																																		.	.	.	.	.
Alig confidence																																		.	.	.	.	.
Template Conservation
Template Sequence		V	S	E	G	F	E	D	Q	I	L	V	S	G	D	T	A	R	K	T	Y	Y	K	H	Y	G	H	G	P	G	L	E	Y	I	A	K	K	W	V	P	R	F	I	D	E	A	N	E	K	G	F	D	G	E	K	L	V	K	K	F	F	V	D	N	P	A	R	C	F	T	F
Template Known Secondary structure				T	T		G	G	G									S	G	G	G	S							S	T	T						T												T	T	S											T								S
Template Predicted Secondary structure
Template SS confidence
		259	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions