Job Description P39408 Confidence 99.73% Date Thu Jan 5 12:00:44 GMT 2012 Rank 36 Aligned Residues 246 % Identity 9% Template c3pnuA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:dihydroorotase; PDBTitle: 2.4 angstrom crystal structure of dihydroorotase (pyrc) from2 campylobacter jejuni. Resolution 2.40 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	D	T	H	C	H	F	D	F	P	P	F	S	G	D	E	E	A	S	L	Q	R	A	A	Q	A	G	V	G	K	I	I	V	P	A	T	E	A	E	N	F	A	R	V	L	A	L	A	E	N	Y	Q	P	L	Y	A	A	L	G	L	H	P	G	M	L	E	K	H	S	D	V	S	L	E	Q	L	Q	Q	A	L
Query Conservation
Alig confidence											.	.	.	.
Template Conservation											.	.	.	.
Template Sequence		L	D	M	H	L	H	L	R	D	.	.	.	.	N	Q	M	L	E	L	I	A	P	L	S	A	R	D	F	C	A	A	V	I	M	P	N	L	I	P	P	L	C	N	L	E	D	L	K	A	Y	K	M	R	I	L	K	A	C	K	D	E	N	F	T	P	L	M	T	L	F	F	K	N	Y	D	E	K	F	L	Y
Template Known Secondary structure										S	.	.	.	.													T	T		S									S	S				S																T	T	S							B				S
Template Predicted Secondary structure											.	.	.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.					.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.											.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure																																																				.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																				.	.	.	.	.	.	.	.	.	.
Query Sequence		E	R	R	P	A	K	V	V	A	V	G	E	I	G	L	D	L	F	G	D	D	P	Q	F	E	R	Q	Q	W	L	L	D	E	Q	L	K	L	A	K	R	Y	D	L	P	V	I	L	H	S	R	.	.	.	.	.	.	.	.	.	.	R	T	H	D	K	L	A	M	H	L	K	R	H	D	L	P	R	T	G	V
Query Conservation																																																				.	.	.	.	.	.	.	.	.	.
Alig confidence																																																				.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	A	K	D	E	I	F	G	I	L	Y	P	A	G	I	T	T	N	S	N	G	G	V	S	S	F	D	I	E	Y	L	K	P	T	L	E	A	M	S	D	L	N	I	P	L	L	V	H	G	E	T	N	D	F	V	M	D	R	E	S	N	F	A	K	I	Y	E	K	L	A	K	H	F	P	R	L	K	I	V	M
Template Known Secondary structure				T	T	T		S	B				B	T	T	S	S	S	S		T	T	S	B																		T	T										S	S		G	G	G	T	T	G	G	G												T	T	S
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.																									.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	H	G	F	S	G	S	L	Q	Q	A	E	R	F	V	Q	L	G	Y	K	I	G	V	G	G	T	I	T	Y	P	R	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	K	T	R	D	V	I	A	K	L	P	L	A	S	L	L	L	E	T	D	A	P	D	M
Query Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.
Template Conservation																		.																																																							.
Template Sequence		E	H	I	T	T	K	T	L	C	E	L	L	K	D	Y	E	.	N	L	Y	A	T	I	T	L	H	H	L	I	I	T	L	D	D	V	I	G	G	K	M	N	P	H	L	F	C	K	P	I	A	K	R	Y	E	D	K	E	A	L	C	E	L	A	F	S	G	Y	E	K	V	M	.	F	G	S	D	S	A	P	H
Template Known Secondary structure			S			S											T	.	T							S	G	G	G	T								T	S	S			G	G	G			S	S																	T	T		T	T			.					B
Template Predicted Secondary structure																		.																																																							.
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.		.	.	.	.	.	.	240	.
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	L	N	G	F	Q	G	Q	P	N	R	P	E	Q	A	A	R	V	F	A	V	L	C	E	L	R	R	E	P	A	D	E	I	A	Q	A	L	L	N	N	T	Y	T	L	F	N	V	P
Query Conservation
Alig confidence																										.	.
Template Conservation																										.	.
Template Sequence		P	K	G	C	A	A	G	V	F	S	A	P	V	I	L	P	V	L	A	E	L	F	K	Q	.	.	N	S	S	E	E	N	L	Q	K	F	L	S	D	N	T	C	K	I	Y	D	L	K
Template Known Secondary structure		B					S		B			G	G	G												.	.		S										T								T
Template Predicted Secondary structure																										.	.
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.			.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions