Return to main results Retrieve Phyre Job Id

Job DescriptionP39408
Confidence97.20%DateThu Jan 5 12:00:44 GMT 2012
Rank140Aligned Residues135
% Identity18%Templatec3ooqC_
PDB info PDB header:hydrolaseChain: C: PDB Molecule:amidohydrolase; PDBTitle: crystal structure of amidohydrolase from thermotoga maritima msb8
Resolution2.06 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  QQWLLDEQLKLAKRYDLPVILHSRRTHDKLAMHLKRHDLPRTGVVHGFSGSLQQAERFVQLGYKIGVGGTITYPRA. . . .
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Template Sequence  ETDLKXEVGEXVLRKKIPARXHAHRADDILTAIRIAEEFGFNLVIEHGTEAYKISKVLAEKKIPVVVGPLLTFRTKLELK
Template Known Secondary structure 


TTSS

ST


TTGGGGTT




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SGGGT
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   205....210.........220.........230.........240.........250.........260.........270.........280....
 
   188.190.........200.........210.........220.........230.........240.........250.........
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Query Sequence  . . . . SKTRDVIAKLPLASLLLETDAPDMPLNGFQGQPNRPEQAARVFAVLCELRREPADEIAQALLNNTYTLFNVP
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Template Sequence  DLTXETIAKLLKDGVL. . IALXCDHP. . . . . . . . . . . VIPLEFATVQAATAXRYGAKEEDLLKILTVNPAKILGLE
Template Known Secondary structure  T

TTTT

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TTT...........TS
GGGGGGGT

TTTTT
T
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   285....290.........300 ........ .310.........320.........330.........340.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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