Job Description P39408 Confidence 35.33% Date Thu Jan 5 12:00:44 GMT 2012 Rank 196 Aligned Residues 182 % Identity 16% Template c3noeA_ PDB info PDB header:lyase Chain: A: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: crystal structure of dihydrodipicolinate synthase from pseudomonas2 aeruginosa Resolution 2.95 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.				.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.								.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Predicted Secondary structure																										.	.	.																		.	.	.	.	.	.	.
Query SS confidence																										.	.	.																		.	.	.	.	.	.	.
Query Sequence		M	I	C	R	F	I	D	T	H	C	H	F	D	F	P	P	F	S	G	D	E	E	A	S	.	.	.	L	Q	R	A	A	Q	A	G	V	G	K	I	I	V	P	A	T	.	.	.	.	.	.	.	E	A	E	N	F	A	R	V	L	A	L	A	E	N	Y	Q	P	L	Y	A	A	L	G	L	H	P	G	M	L
Query Conservation																										.	.	.																		.	.	.	.	.	.	.
Alig confidence																										.	.	.																		.	.	.	.	.	.	.
Template Conservation
Template Sequence		M	I	A	G	S	M	V	A	L	V	T	P	F	D	A	Q	G	R	L	D	W	D	S	L	A	K	L	V	D	F	H	L	Q	D	G	T	N	A	I	V	A	V	G	T	T	G	E	S	A	T	L	D	V	E	E	H	I	Q	V	V	R	R	V	V	D	Q	V	K	G	R	I	P	V	I	A	G	T	G	A	N
Template Known Secondary structure														B		T	T	S		B																T		S					S	S	T	T	T	T	G	G	G																		T	T	S	S									S
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
Predicted Secondary structure																																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	K	H	S	D	V	S	L	E	Q	L	Q	Q	A	L	E	R	R	P	A	K	V	V	A	V	G	E	I	G	L	D	L	F	G	D	D	P	Q	F	E	R	Q	Q	W	L	L	D	E	Q	L	K	L	A	K	R	Y	D	L	P	V	I	L	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.	.	.	.																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation				.	.	.	.	.	.	.	.	.	.
Template Sequence		S	T	.	.	.	.	.	.	.	.	.	.	R	E	A	V	A	L	T	E	A	A	K	S	G	G	A	D	A	C	L	L	V	T	P	Y	Y	N	K	P	T	Q	E	G	M	Y	Q	H	F	R	H	I	A	E	A	V	A	I	P	Q	I	L	Y	N	V	P	G	R	T	S	C	D	M	L	P	E	T	V	E	R
Template Known Secondary structure		S		.	.	.	.	.	.	.	.	.	.												T	T	T		S									S	S																		S		S												S
Template Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.
Template SS confidence
		81	.											.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
														134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	S	R	R	T	H	D	K	L	A	M	H	L	K	R	H	D	L	P	R	T	G	V	V	H	G	F	S	G	S	L	Q	Q	A	E	R	F	V	Q	L	G	Y	K	I	G	V	G	G	T	I	T	Y	P	R	A	S	K	T	R	D	V	I	A	K	L
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.																											.
Template Conservation																																				.	.	.	.																											.
Template Sequence		L	S	K	V	P	N	I	I	G	I	K	E	A	T	G	D	L	Q	R	A	K	E	V	I	E	R	V	G	K	D	F	L	V	Y	.	.	.	.	S	G	D	D	A	T	A	V	E	L	M	L	L	G	G	K	G	N	I	S	V	T	A	N	V	A	.	P	R	A	M	S	D	L	C	A	A	A
Template Known Secondary structure				T	S	T	T								S													S		T	T	S				.	.	.	.				T	T	T							T	T							S	G	G	G	T		.
Template Predicted Secondary structure																																				.	.	.	.																											.
Template SS confidence
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.					.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210		.	.	.	.	.	.	.	.	.	220	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions