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Job DescriptionP39408
Confidence97.89%DateThu Jan 5 12:00:44 GMT 2012
Rank130Aligned Residues253
% Identity11%Templatec3mpgB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:dihydroorotase; PDBTitle: dihydroorotase from bacillus anthracis
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10..... ....20.........30.........40. ........50.........60.........70......
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Query Sequence  FIDTHCHFDFP. . PFSGDEEASLQRAAQAGVGKIIVPAT. . . . . . EAENFARVLALAENYQPLYAALGLHPGMLEKHSDV
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Template Sequence  LVDVHVHLREPGGEHKETIETGTLAAAKGGFTTICAMPNTRPVPDCREHMEDLQNRIKEKAHVNVLPYGAITVRQAGSEM
Template Known Secondary structure 


TTT
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   55....60.........70.........80.........90.........100.........110.........120.........130....
 
   77..80..... ....90.........100.........110.......
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Query Sequence  SLEQLQQAL. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ERRPAKVVAVGEIGLDLFGDDPQFERQQWLLD
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Template Conservation                                                                                  
Template Sequence  TDFETLKELGAFAFTDDGVGVQDASMMLAAMKRAAKLNMAVVAHCEENTLINKGCVHEGKFSEKHGLNGIPSVCESVHIA
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   135....140.........150.........160.........170.........180.........190.........200.........210....
 
   118.120.........130.........140........ .150.........160.........170.........180.........190......
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Query Sequence  EQLKLAKRYDLPVILHSRRTHDKLAMHLKRH. DLPRTGVVHGFSGSLQQAERFVQLGYKIGVGGTITYPRASKTRDVIAK
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Template Conservation       
                                                                          
Template Sequence  RDILLAEAADCHYHVCHVSTKGSVRVIRDAKRAGIKVTAEVTPHHLVLCEDDIPSADPNFKMNPPLRGKEDHEALIEGLL
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T




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   215....220.........230.........240.........250.........260.........270.........280.........290....
 
   197..200......... 210.........220.........230.........240.........250........
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Query Sequence  LPLASLLLETDAP. . . . . . . . DMPLNGFQGQPNRPEQAARVFAVLCELRREPADEIAQALLNNTYTLFNV
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Template Sequence  DG. TIDMIATDHAPHTAEEKAQGIERAPFGITGFETAFPLLYTNLVKKGIITLEQLIQFLTEKPADTFGL
Template Known Secondary structure  T.SS



B



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TTTTTTTTSS
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   295. ...300.........310.........320.........330.........340.........350.........360...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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