Job Description P39408 Confidence 99.00% Date Thu Jan 5 12:00:44 GMT 2012 Rank 75 Aligned Residues 248 % Identity 12% Template c3lu2B_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:lmo2462 protein; PDBTitle: structure of lmo2462, a listeria monocytogenes amidohydrolase family2 putative dipeptidase Resolution 2.20 Å

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		3	.	.	.	.	.	.	10	.	.											.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.				.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.																											.	.	.
Query SS confidence												.	.	.	.	.	.	.	.	.	.																											.	.	.
Query Sequence		C	R	F	I	D	T	H	C	H	F	.	.	.	.	.	.	.	.	.	.	D	F	P	P	F	S	G	D	E	E	A	S	L	Q	R	A	A	Q	A	G	V	G	K	I	I	V	.	.	.	P	A	T	E	A	E	N	F	A	R	V	L	A	L	A	E	N	Y	Q	P	L	Y	A	A	L	G	L	H	P	G	M
Query Conservation												.	.	.	.	.	.	.	.	.	.																											.	.	.
Alig confidence												.	.	.	.	.	.	.	.	.	.																											.	.	.
Template Conservation
Template Sequence		X	R	V	I	D	T	H	C	D	A	L	Y	K	L	Q	A	G	K	G	K	Y	T	F	Q	D	A	E	E	L	D	V	N	F	E	R	L	I	E	A	K	X	L	L	Q	G	F	A	I	F	L	D	E	D	I	P	V	E	H	K	W	K	K	A	V	E	Q	V	N	I	F	K	Q	H	V	L	H	K	G	G	I
Template Known Secondary structure																		T	T	T				T	T	T		T	T		S	S									T												T	T	S		G	G	G																T	T	T	G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		70	.	.																							.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.						.	.	.	.	.	.	120	.	.
Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																										.	.	.	.	.
Query SS confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																										.	.	.	.	.
Query Sequence		L	E	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	S	D	V	S	L	E	Q	L	Q	Q	A	L	E	R	R	P	A	K	V	V	A	V	G	E	I	G	L	D	L	F	G	D	D	P	Q	F	E	R	Q	Q	.	.	.	.	.	W	L	L	D	E	Q	L	K	L
Query Conservation					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																										.	.	.	.	.
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																										.	.	.	.	.
Template Conservation
Template Sequence		I	H	H	V	K	K	W	C	D	L	E	N	L	P	E	D	K	I	G	A	X	L	T	L	E	G	I	E	P	I	G	R	D	L	D	K	L	T	Q	L	L	D	G	G	V	L	S	V	G	L	T	W	N	N	A	N	L	A	A	D	G	I	X	E	E	R	G	A	G	L	T	R	F	G	K	D	I	I	H	L
Template Known Secondary structure							S						T			T	T										S	S	G	G	G	T	T											T	T						S		S	S	S			S	S	B		B	T	T		T	T				B
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.										.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.
Query SS confidence																																									.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.
Query Sequence		A	K	R	Y	D	L	P	V	I	L	H	S	R	R	T	H	D	K	L	A	M	H	L	K	R	H	D	L	P	R	T	G	V	V	H	G	F	S	G	.	.	.	.	.	.	.	.	.	S	L	Q	Q	A	E	R	F	V	Q	L	G	Y	K	I	G	V	G	G	T	I	T	Y	P	R	A	.	.	.	.	.	.
Query Conservation																																									.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.
Alig confidence												.																	.	.											.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.
Template Conservation												.																	.	.
Template Sequence		L	N	E	R	K	V	F	T	D	V	.	S	H	L	S	V	K	A	F	W	E	T	L	E	Q	A	E	.	.	F	V	I	A	S	H	S	S	A	K	A	I	C	A	H	P	R	N	L	D	D	E	Q	I	K	A	X	I	E	H	D	A	X	I	H	V	I	F	H	P	L	F	T	T	N	D	G	V	A	D	I
Template Known Secondary structure					T	T						.	T	T	B													S	.	.	S				S	S			B	T	T	T	S			T	T	S	B											T	T														T	T	S			B
Template Predicted Secondary structure												.																	.	.
Template SS confidence
		161	.	.	.	.	.	.	.	.	170		.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.			.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
						188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.
Query SS confidence		.	.	.	.
Query Sequence		.	.	.	.	S	K	T	R	D	V	I	A	K	L	P	L	A	S	L	L	L	E	T	D	A	P	D	M	P	L	N	G	F	Q	G	Q	P	N	R	P	E	Q	A	A	R	V	F	A	V	L	C	E	L	R	R	E	P	A	D	E	I	A	Q	A	L	L	N	N	T	Y	T	L	F	N
Query Conservation		.	.	.	.
Alig confidence		.	.	.	.																																.	.														.	.
Template Conservation																																					.	.														.	.
Template Sequence		E	D	V	I	R	H	I	D	H	I	C	E	L	G	G	X	K	N	I	G	F	G	S	D	F	D	G	I	P	D	H	V	K	G	L	.	.	E	H	A	G	K	Y	Q	N	F	L	E	T	L	.	.	G	K	H	Y	T	K	E	E	V	E	G	F	A	S	R	N	F	L	N	H	L	P
Template Known Secondary structure														T	T		G	G	G							B	T	S		S	S			B	T		.	.	S	S	G	G	G									.	.	T	T	T	S										T					T	T
Template Predicted Secondary structure																																					.	.														.	.
Template SS confidence
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.			.	.	.	.	.	.	.	280	.	.	.	.	.			.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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