Job Description P39408 Confidence 99.12% Date Thu Jan 5 12:00:44 GMT 2012 Rank 66 Aligned Residues 253 % Identity 15% Template c3lnpA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:amidohydrolase family protein olei01672_1_465; PDBTitle: crystal structure of amidohydrolase family protein2 olei01672_1_465 from oleispira antarctica Resolution 2.10 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.																															20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	I	D	T	H	C	H	F	D	F	P	P	F	S	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	E	E	A	S	L	Q	R	A	A	Q	A	G	V	G	K	I	I	V	P	A	T	E	A	E	N	F	A	R	V	L	A	L	A	E
Query Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		W	V	N	A	H	G	H	A	A	X	S	L	F	R	G	L	A	D	D	L	P	L	X	T	W	L	Q	E	H	V	W	P	A	E	A	Q	H	V	D	E	H	F	V	K	Q	G	T	E	L	A	I	A	E	X	I	Q	S	G	T	T	T	F	A	D	X	Y	F	Y	P	Q	Q	S	G	E	A	A	L	A	A	G
Template Known Secondary structure						S			G	G	G	G	G	G	T	T	S	S		S										T										S																		T	T									S													T
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		55	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	Y	Q	P	L	Y	A	A	L	G	L	H	P	G	M	L	E	K	H	S	D	V	S	L	E	Q	L	Q	Q	A	L	E	R	R	P	A	K	V	V	A	V	G	E	I	G	L	D	L	F	G	D	D	P	Q	F	E	R	Q	Q	W	L	L	D	E	Q	L	K	L	A	K	R	Y	D	L	P	V	I	L	H	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	R	A	V	C	F	A	P	V	L	D	F	P	T	N	Y	A	Q	N	A	D	E	Y	I	R	K	A	I	E	C	N	D	R	F	N	N	H	P	X	N	E	Q	G	L	V	Q	I	G	F	G	P	H	A	P	Y	T	V	S	D	E	P	L	K	E	I	T	X	L	S	D	Q	L	D	X	P	V	Q	I	H	L
Template Known Secondary structure												S	S			S	S		S	S																	S		G	G	G	T	T												T	T	T	S																T
Template Predicted Secondary structure
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150														.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.																																																			.
Query SS confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.																																																			.
Query Sequence		R	R	T	H	D	K	L	A	M	H	L	K	R	H	D	L	.	.	.	.	.	.	.	.	.	.	.	.	.	P	R	T	G	V	V	H	G	F	S	G	S	L	Q	Q	A	E	R	F	V	Q	L	G	Y	K	I	G	V	G	G	T	I	T	Y	P	R	A	S	K	T	R	D	V	I	A	K	L	P	L	A	.
Query Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.																																																			.
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.																																																			.
Template Conservation
Template Sequence		H	E	T	D	F	E	V	S	E	S	L	E	T	F	N	K	R	P	T	Q	R	L	A	D	I	G	F	L	N	E	R	V	S	C	V	H	X	T	Q	V	D	D	G	D	I	K	I	L	Q	K	T	G	A	S	I	I	H	C	P	E	S	N	L	K	L	A	S	G	F	C	P	I	A	K	L	S	A	A	N	I
Template Known Secondary structure		S		S												S	S									T	T			S	T	T								S																										T	T												T	T
Template Predicted Secondary structure
Template SS confidence
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	L	L	E	T	D	A	P	D	M	P	L	N	G	F	Q	G	Q	P	N	R	P	E	Q	A	A	R	V	F	A	V	L	C	E	L	R	R	E	P	A	D	E	I	A	Q	A	L	L	N	N	T	Y	T	L	F	N	V
Query Conservation
Alig confidence																																						.
Template Conservation																																						.
Template Sequence		P	L	A	I	G	T	D	G	A	A	S	N	N	D	L	D	X	F	S	E	T	K	T	A	A	L	L	A	K	G	V	S	Q	D	A	S	.	A	I	P	A	I	E	A	L	T	X	A	T	L	G	G	A	R	A	L	G	I
Template Known Secondary structure										T	T	S	S																					T		T	T	.	S	S										T							T	T
Template Predicted Secondary structure																																						.
Template SS confidence
		325	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360		.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions