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Job DescriptionP39408
Confidence98.39%DateThu Jan 5 12:00:44 GMT 2012
Rank113Aligned Residues139
% Identity15%Templatec3itcA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:renal dipeptidase; PDBTitle: crystal structure of sco3058 with bound citrate and glycerol
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   114.....120.........130.........140.........150.........160. ........170.........180....
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Query Sequence  WLLDEQLKLAKRYDLPVILHSRRTHDKLAMHLKRHDLPRTGVVHGFSG. . . . . . . . . SLQQAERFVQLGYKIGVGGTITY
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Template Sequence  AFGREVVREMNREGMLVDL. . SHVAATTMRDALDTSTAPVIFSHSSSRAVCDHPRNIPDDVLERLSANGGMAMVTFVPKF
Template Known Secondary structure  T

..TTB

SS

SS

BTTTS

TTSB
T



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   171........180......... 190.........200.........210.........220.........230.........240........
 
   185....190. ........200.........210.....
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Query Sequence  PRASKTR. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . DVIAKLPLASLLLETDAPDMPLNG
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Template Sequence  VLQAAVDWTAEADDNMRAHGFHHLDSSPEAMKVHAAFEERVPRPVATVSTVADHLDHMREVAGVDHLGIGGDYDGTPFTP
Template Known Secondary structure 
TT

TT

SS




B
GGG


BTS
S


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   249250.........260.........270.........280.........290.........300.........310.........320........
 
   216...220.........230.........240.........250.......
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Query Sequence  FQGQPNRPEQAARVFAVLCELRREPADEIAQALLNNTYTLFN
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Template Sequence  DGL. . GDVSGYPNLIAELLD. RGWSQSDLAKLTWKNAVRVLD
Template Known Secondary structure  BT
..SSGGG.TT

T
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   329330. ........340...... ...350.........360.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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