Job Description P39408 Confidence 100.00% Date Thu Jan 5 12:00:44 GMT 2012 Rank 3 Aligned Residues 254 % Identity 26% Template c3ipwA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:hydrolase tatd family protein; PDBTitle: crystal structure of hydrolase tatd family protein from entamoeba2 histolytica Resolution 1.95 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.											.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.						.	60	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.																																										.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.	.	.																																										.	.	.	.	.
Query Sequence		M	I	C	R	F	I	D	T	H	C	H	F	D	F	P	P	F	.	.	.	.	.	.	.	.	.	.	S	G	D	E	E	A	S	L	Q	R	A	A	Q	A	G	V	G	K	I	I	V	P	A	T	E	A	E	N	F	A	R	V	L	A	L	A	E	N	Y	Q	P	.	.	.	.	.	L	Y	A	A	L	G	L
Query Conservation																			.	.	.	.	.	.	.	.	.	.																																										.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.	.	.																																										.	.	.	.	.
Template Conservation
Template Sequence		M	A	Q	Q	F	I	D	I	G	A	N	L	T	D	D	N	Y	F	G	N	Y	H	G	K	H	Y	H	E	E	D	I	D	V	V	L	Q	R	A	E	R	N	G	L	S	H	I	I	I	T	S	G	C	L	N	D	F	K	K	A	I	E	I	I	N	K	Y	Q	N	L	T	N	I	K	L	V	T	T	I	G	V
Template Known Secondary structure													T	T	S	G	G	G	G	T			T	T				S														T	T										S															G	G	G		S	S
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		66	.	.	.	70	.	.	.	.		.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.		.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.		.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
Predicted Secondary structure											.																															.																							.
Query SS confidence											.																															.																							.
Query Sequence		H	P	G	M	L	E	K	H	S	.	D	V	S	L	E	Q	L	Q	Q	A	L	E	R	R	P	A	K	V	V	A	V	G	E	I	G	L	D	L	F	G	.	D	D	P	Q	F	E	R	Q	Q	W	L	L	D	E	Q	L	K	L	A	K	R	Y	.	D	L	P	V	I	L	H	S	R	R	T	H	D	K	L	A
Query Conservation											.																															.																							.
Alig confidence											.																															.																							.
Template Conservation
Template Sequence		H	P	T	R	T	N	E	L	K	Q	E	G	Y	L	D	E	L	L	L	L	C	E	K	N	I	D	K	V	V	A	I	G	E	I	G	L	D	Y	E	R	L	Q	F	S	D	K	E	T	Q	L	S	G	Y	R	T	L	S	I	L	H	Q	K	Y	P	Y	L	P	F	F	F	H	C	R	K	S	W	S	D	L	C
Template Known Secondary structure			G	G	G	G	G	G	G	G	S	T	T												T	G	G	G											T	T			S	S	S												T								T	T									S
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		143	.	.	.	.	.	.	150	.	.		.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure												.																																																																.	.	.	.	.	.
Query SS confidence												.																																																																.	.	.	.	.	.
Query Sequence		M	H	L	K	R	H	D	L	P	R	.	T	G	V	V	H	G	F	S	G	S	L	Q	Q	A	E	R	F	V	Q	L	G	Y	K	I	G	V	G	G	T	I	T	Y	P	R	A	S	K	T	R	D	V	I	A	K	L	P	L	A	S	L	L	L	E	T	D	A	P	D	M	P	L	N	G	.	.	.	.	.	.
Query Conservation												.																																																																.	.	.	.	.	.
Alig confidence												.																																.	.																															.	.	.	.	.	.
Template Conservation																																												.	.
Template Sequence		Q	L	N	K	E	L	G	Y	N	G	C	K	G	V	V	H	C	F	D	G	T	E	E	E	M	N	Q	I	L	N	E	G	W	D	I	G	V	T	G	N	S	L	.	.	Q	S	I	E	L	L	N	V	M	K	Q	I	P	I	E	R	L	H	I	E	T	D	C	P	Y	C	G	I	K	K	T	S	A	G	F	K
Template Known Secondary structure							T	T		T	T	S						S														T	T							S	G	G	G	.	.	S	S								T	T	S		G	G	G							T	T	S					T	T	S	G	G	G	G
Template Predicted Secondary structure																																												.	.
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.			.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
																				216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	Q	G	Q	P	N	R	P	E	Q	A	A	R	V	F	A	V	L	C	E	L	R	R	E	P	A	D	E	I	A	Q	A	L	L	N	N	T	Y	T	L	F
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	L	K	E	K	D	F	G	V	K	V	E	K	Y	Q	R	N	K	Y	V	Q	R	R	N	E	P	S	N	I	I	D	I	A	I	I	M	S	S	I	K	H	I	S	L	F	E	F	V	N	K	V	Y	S	N	S	M	N	M	Y
Template Known Secondary structure		G		S	S					B		G	G	G			T	T	S		B	T	T				G	G	G													T
Template Predicted Secondary structure
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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