Job Description P39408 Confidence 99.97% Date Thu Jan 5 12:00:44 GMT 2012 Rank 20 Aligned Residues 233 % Identity 15% Template c3ij6A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:uncharacterized metal-dependent hydrolase; PDBTitle: crystal structure of an uncharacterized metal-dependent2 hydrolase from lactobacillus acidophilus Resolution 2.00 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.																							.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.																.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	F	I	D	T	H	C	H	F	D	F	P	P	F	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	D	E	E	A	S	L	Q	R	A	A	Q	A	G	V	G	K	I	I	V	P	A	T	E	A	E	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F
Query Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	K	I	D	A	Y	A	H	I	L	P	A	K	Y	Y	Q	K	M	L	S	V	E	P	N	I	P	N	M	F	P	F	I	K	I	K	T	L	M	D	L	D	E	R	L	T	K	W	P	D	Q	N	T	K	Q	V	I	S	L	A	N	I	S	P	E	D	F	T	D	S	K	T	S	A	E	L	C	Q	S	A	N
Template Known Secondary structure																								T	T						G	G	G	G													T		S		T	T									S			G	G	G	T	S
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		47	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	R	V	L	A	L	A	E	N	Y	Q	P	L	Y	A	A	L	G	L	H	P	G	M	L	E	K	H	S	D	V	S	L	E	Q	L	Q	Q	A	L	E	R	R	P	A	K	V	V	A	V	G	E	I	G	L	D	L	F	G	D	D	P	Q	F	E	R	Q	Q	W	L	L	D	E	Q	L	K	L	A	K	R	Y
Query Conservation
Alig confidence																												.	.	.	.	.	.	.	.	.
Template Conservation																												.	.	.	.	.	.	.	.	.
Template Sequence		E	E	L	S	N	L	V	D	Q	H	P	G	K	F	A	G	A	V	A	I	L	P	M	N	N	I	.	.	.	.	.	.	.	.	.	E	S	A	C	K	V	I	S	S	I	K	D	D	E	N	L	V	G	A	Q	I	F	T	R	H	L	G	K	S	I	A	D	K	E	F	R	P	V	L	A	Q	A	A	K	L
Template Known Secondary structure												T	T	T										T	T			.	.	.	.	.	.	.	.	.														T	T								S			T	T			T	T	S	T	T	T										T
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.	.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.										.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
		127	.	.	130	.	.	.	.	.	.	.																						.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.											.	.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.
Query Sequence		D	L	P	V	I	L	H	S	R	R	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	D	K	L	A	M	H	L	K	R	H	D	L	P	R	T	G	V	V	H	G	F	S	G	S	L	Q	Q	A	E	R	F	V	Q	L	.	.	.	.	.	.	.	.	.	.	G	Y	K
Query Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		H	V	P	L	W	M	H	P	V	F	D	A	R	K	P	D	N	N	L	V	F	S	W	E	Y	E	L	S	Q	A	M	L	Q	L	V	Q	S	D	L	F	Q	D	Y	P	N	L	K	I	L	V	H	H	A	G	A	M	V	P	F	F	S	G	R	I	D	H	I	L	D	E	K	H	A	Q	D	F	K	K	F	Y
Template Known Secondary structure		T											T	T	S	S	S			T	T	T																T	T						T	T						S	G	G	G	T	T	T	T	T	S								S								G	G	G
Template Predicted Secondary structure
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	G	V	G	G	T	I	T	Y	P	R	A	S	K	T	R	D	V	I	A	K	L	P	L	A	S	L	L	L	E	T	D	A	P	D	M	P	L	N	G	F	Q	G	Q	P	N	R	P	E	Q	A	A	R	V	F	A	V	L	C	E	L	R	R	E	P	A	D	E	I	A	Q	A	L	L	N	N	T	Y	T	L
Query Conservation
Alig confidence							.	.	.																																		.	.	.	.	.	.	.	.	.
Template Conservation							.	.	.																																		.	.	.	.	.	.	.	.	.
Template Sequence		V	D	T	A	I	.	.	.	L	G	N	T	P	A	L	Q	L	A	I	D	Y	Y	G	I	D	H	V	L	F	G	T	D	A	P	F	A	V	M	P	S	G	.	.	.	.	.	.	.	.	.	A	D	Q	I	I	T	Q	A	I	N	D	L	T	I	S	D	K	D	K	Q	K	I	F	H	D	N	Y	Y	S	L
Template Known Secondary structure						S	.	.	.	S	S														G	G	G							B	T	S	S	S	T	T	T		.	.	.	.	.	.	.	.	.	S										T	S	S	S										T
Template Predicted Secondary structure							.	.	.																																		.	.	.	.	.	.	.	.	.
Template SS confidence
		234	.	.	.	.				.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.										.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
		256	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	K
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		302	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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